Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0398
(416 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 33 0.10
At5g01680.1 68418.m00085 cation/hydrogen exchanger, putative (CH... 30 0.54
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 30 0.72
At5g20470.1 68418.m02433 myosin, putative similar to PIR|T00727 ... 30 0.72
At3g04990.1 68416.m00542 hypothetical protein 29 0.95
At1g64630.1 68414.m07327 protein kinase family protein contains ... 29 0.95
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 29 1.3
At5g14720.1 68418.m01727 protein kinase family protein contains ... 29 1.7
At3g17360.1 68416.m02218 kinesin motor protein-related similar t... 29 1.7
At5g20580.2 68418.m02444 expressed protein predicted protein, Ar... 28 2.2
At5g20580.1 68418.m02443 expressed protein predicted protein, Ar... 28 2.2
At3g47890.1 68416.m05222 ubiquitin carboxyl-terminal hydrolase-r... 28 2.9
At1g18410.1 68414.m02299 kinesin motor protein-related similar t... 27 3.8
At5g17920.1 68418.m02101 5-methyltetrahydropteroyltriglutamate--... 27 5.1
At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7) ident... 27 5.1
At2g37080.1 68415.m04550 myosin heavy chain-related low similari... 27 5.1
At1g65540.1 68414.m07435 calcium-binding EF hand family protein ... 27 5.1
At4g12620.1 68417.m01988 replication control protein, putative s... 27 6.7
At2g37420.1 68415.m04589 kinesin motor protein-related 27 6.7
At3g03780.2 68416.m00387 5-methyltetrahydropteroyltriglutamate--... 26 8.9
At3g03780.1 68416.m00386 5-methyltetrahydropteroyltriglutamate--... 26 8.9
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 26 8.9
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 32.7 bits (71), Expect = 0.10
Identities = 17/84 (20%), Positives = 42/84 (50%)
Frame = +2
Query: 152 SKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLA 331
S+ QE+ K +E D++ +L+ + LTS EL + +++ + + L ++ ++
Sbjct: 153 SEHQEILKKLKESDEICGNLRVETEKLTSENKELNEKLEVAGETESDLNQKLEDVKKERD 212
Query: 332 EIGAAVGGSELDFKLNVDTVRKLE 403
+ A + D + ++ V +L+
Sbjct: 213 GLEAELASKAKDHESTLEEVNRLQ 236
>At5g01680.1 68418.m00085 cation/hydrogen exchanger, putative
(CHX26) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 780
Score = 30.3 bits (65), Expect = 0.54
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 73 NKQNEAAKEEVKEVLQALEELAVNYDQQVAGGRQQES 183
NK N A +EE +++ L E NYD + G R ++S
Sbjct: 696 NKHNVALREEASDLVNLLREEGNNYDLIMVGIRHEKS 732
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 29.9 bits (64), Expect = 0.72
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 164 EVDSKSRECDQLSEDLQSKQSALTSATAELQQLR 265
E+++ +R+ DQL E +Q + L+++ +E+Q LR
Sbjct: 1030 ELENATRKADQLHESVQRLEEKLSNSESEIQVLR 1063
>At5g20470.1 68418.m02433 myosin, putative similar to PIR|T00727
myosin heavy chain PCR43 [Arabidopsis thaliana]
Length = 556
Score = 29.9 bits (64), Expect = 0.72
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 164 EVDSKSRECDQLSEDLQSKQSALTSATAELQQLR 265
E+++ +R+ DQL E +Q + L+++ +E+Q LR
Sbjct: 231 ELENATRKADQLHESVQRLEEKLSNSESEIQVLR 264
>At3g04990.1 68416.m00542 hypothetical protein
Length = 227
Score = 29.5 bits (63), Expect = 0.95
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 158 SQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDL 271
S+E+D K +E LS DL+ K A + +E+ L+ L
Sbjct: 36 SRELDLKEKELQILSSDLEQKSHAFEAEKSEVGDLKKL 73
>At1g64630.1 68414.m07327 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719;
contains serine/threonine protein kinases active-site
signature, PROSITE:PS00108
Length = 524
Score = 29.5 bits (63), Expect = 0.95
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 143 ITTSKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLR 322
+ S + + S + ++ D K + T E+ + DLS+H+ IAE++ L+
Sbjct: 353 VAASMALRIAGSSGQARKVDFDFNLKTDTARAVTGEMVEELDLSSHEVTVIAEMIDELIM 412
Query: 323 DL 328
L
Sbjct: 413 KL 414
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 29.1 bits (62), Expect = 1.3
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 143 ITTSKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLR 322
++ SKS+E + + +L E ++ A T L + +L A + K IA T + +
Sbjct: 316 LSMSKSKETEEDITK--RLEELTTKEKEAHTLQITLLAKENELRAFEEKLIAREGTEIQK 373
Query: 323 DLAEIGAAVGGSELDFKLNVDTVRK-LEEE 409
+ + +G L+F+L + +RK L++E
Sbjct: 374 LIDDQKEVLGSKMLEFELECEEIRKSLDKE 403
>At5g14720.1 68418.m01727 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 674
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 149 TSKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQ--QLRDL 271
TS ++E D ++C++ E S + A +SATA Q +L D+
Sbjct: 354 TSHAEEPDFNQKQCERQDESALSPERASSSATAPSQDDELNDI 396
>At3g17360.1 68416.m02218 kinesin motor protein-related similar to
KLP2 protein GB:CAA63826 from [Xenopus laevis]
Length = 2008
Score = 28.7 bits (61), Expect = 1.7
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Frame = +2
Query: 152 SKSQEVDSKSRECDQLSEDLQSKQSALTSATAE-------LQQLRD---LSAHQRKRIAE 301
SK QEV + R D L +D +S S L + L QL++ L + Q + +
Sbjct: 1863 SKEQEVMNLKRHIDYLFKDRESCMSELNKKDTDVLATQISLDQLQERVQLLSMQNEMLKN 1922
Query: 302 LLTNLLRDLAEIGAAVGGSE 361
+NLLR LAE+ V ++
Sbjct: 1923 DKSNLLRKLAELDRTVHNAQ 1942
>At5g20580.2 68418.m02444 expressed protein predicted protein,
Arabidopsis thaliana
Length = 348
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 143 ITTSKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRD 268
+ ++ QE+ + S E DQL +L +S ++ E+Q +R+
Sbjct: 253 LVATRDQELRTLSAEVDQLHSELNLARSLISERDREIQHVRN 294
>At5g20580.1 68418.m02443 expressed protein predicted protein,
Arabidopsis thaliana
Length = 348
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 143 ITTSKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRD 268
+ ++ QE+ + S E DQL +L +S ++ E+Q +R+
Sbjct: 253 LVATRDQELRTLSAEVDQLHSELNLARSLISERDREIQHVRN 294
>At3g47890.1 68416.m05222 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1568
Score = 27.9 bits (59), Expect = 2.9
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 40 MRRYKET*IESNKQNEAAKEEVKEVLQALEELAVNYDQQVAGGR--QQES 183
+RR E IESN E+K+ +++EE+ + +VA R QQ+S
Sbjct: 193 IRRMAEDPIESNLVQTRRPNEIKKANKSIEEIRKEVEVRVAAARLLQQKS 242
>At1g18410.1 68414.m02299 kinesin motor protein-related similar to
kinesin-related protein GB:AAF24855 GI:6692749 from
[Arabidopsis thaliana]
Length = 1140
Score = 27.5 bits (58), Expect = 3.8
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +2
Query: 140 LITTSKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLL 319
L TT K+ E ++C Q+ + + + EL+Q+R ++ RK + E +
Sbjct: 369 LETTKKAYE-----QQCLQMESKTKGATAGIEDRVKELEQMRKDASVARKALEE----RV 419
Query: 320 RDLAEIGAAVGGSELDFKLNVDTVRKLEEE 409
R+L ++G +++ + V ++K ++E
Sbjct: 420 RELEKMGKEADAVKMNLEEKVKELQKYKDE 449
>At5g17920.1 68418.m02101
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase / vitamin-B12-independent methionine
synthase / cobalamin-independent methionine synthase
(CIMS) identical to SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana}
Length = 765
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 37 IMRRYKET*IESNKQNEAAKEEVKEVLQALEELAVN 144
+ R YK + +A KEE+K+V+ EEL ++
Sbjct: 449 VRREYKAKKVSEEDYVKAIKEEIKKVVDLQEELDID 484
>At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7)
identical to COP1-Interacting Protein 7 (CIP7)
GI:3327868 from [Arabidopsis thaliana]
Length = 1058
Score = 27.1 bits (57), Expect = 5.1
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2
Query: 158 SQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEI 337
S+ D+KSR + ++K+ A S A + ++ ++KR+ ELL + +AE
Sbjct: 724 SKGKDAKSRASSRPDPASKAKRPAWGSRAAVSKSKSEMEEERKKRMEELLIQRQKRIAE- 782
Query: 338 GAAVGGS 358
+ GGS
Sbjct: 783 -KSSGGS 788
>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
to myosin heavy chain [Rana catesbeiana] GI:4249701
Length = 583
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 137 PLITTSKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAEL 304
P + + SQ + + +QLS K+ A A QQL +++A + RI EL
Sbjct: 77 PELASQISQLQEELKKAKEQLSASEALKKEAQDQAEETKQQLMEINASEDSRIDEL 132
>At1g65540.1 68414.m07435 calcium-binding EF hand family protein
similar to leucine zipper-EF-hand containing
transmembrane protein 1 [Homo sapiens] GI:4235226;
contains Pfam profile PF00036: EF hand
Length = 736
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 158 SQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRI 295
SQ ++ ECD+ E L ++ + E Q D+S QR R+
Sbjct: 111 SQTKEASPEECDEAVEGLSLAKAKAKAMKLEESQKSDISIMQRVRL 156
>At4g12620.1 68417.m01988 replication control protein, putative
similar to origin recognition complex subunit 1
(Replication control protein 1)[Homo sapiens]
SWISS-PROT:Q13415
Length = 813
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 155 KSQEVDSKSRECDQLSEDLQSKQSALTSA 241
K +EVD E + E L+SK+ LTSA
Sbjct: 361 KEEEVDDSDEEMELDDEVLKSKRGGLTSA 389
>At2g37420.1 68415.m04589 kinesin motor protein-related
Length = 1039
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 200 SEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD 325
S DL+ K +++ S +++ SA + +A+ + NLL D
Sbjct: 649 SSDLEKKNTSIVSQIEAVEKFLTTSATEASAVAQDIHNLLND 690
>At3g03780.2 68416.m00387
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase, putative / vitamin-B12-independent
methionine synthase, putative / cobalamin-independent
methionine synthase, putative very strong similarity to
SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana};
contains Pfam profile PF01717: Methionine synthase,
vitamin-B12 independent
Length = 765
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 37 IMRRYKET*IESNKQNEAAKEEVKEVLQALEELAVN 144
+ R YK I +A KEE+K+V+ E+L ++
Sbjct: 449 VRREYKAKKISEEDYVKAIKEEIKKVVDIQEDLDID 484
>At3g03780.1 68416.m00386
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase, putative / vitamin-B12-independent
methionine synthase, putative / cobalamin-independent
methionine synthase, putative very strong similarity to
SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana};
contains Pfam profile PF01717: Methionine synthase,
vitamin-B12 independent
Length = 765
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 37 IMRRYKET*IESNKQNEAAKEEVKEVLQALEELAVN 144
+ R YK I +A KEE+K+V+ E+L ++
Sbjct: 449 VRREYKAKKISEEDYVKAIKEEIKKVVDIQEDLDID 484
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 26.2 bits (55), Expect = 8.9
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 161 QEVDSKSRECDQLSEDLQSKQSALTSATAELQQ 259
+++D+K +E L E ++S +S + ELQ+
Sbjct: 197 EKIDNKEKEVHDLKEKIKSLESDVAKGKTELQK 229
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,599,405
Number of Sequences: 28952
Number of extensions: 94951
Number of successful extensions: 376
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 635399168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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