Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0394
         (429 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   5.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   5.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   5.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.6  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = -2

Query: 200 LGINARQTRHFIEQCSRAHVYYNNTRFAEKRPEHQSNY 87
           +G+    ++H        + Y ++   A++ P H SNY
Sbjct: 5   VGMYGHHSQHGTYPSDNYYNYTSDIPNAQQMPPHYSNY 42


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = -2

Query: 200 LGINARQTRHFIEQCSRAHVYYNNTRFAEKRPEHQSNY 87
           +G+    ++H        + Y ++   A++ P H SNY
Sbjct: 5   VGMYGHHSQHGTYPSDNYYNYTSDIPNAQQMPPHYSNY 42


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = -2

Query: 200 LGINARQTRHFIEQCSRAHVYYNNTRFAEKRPEHQSNY 87
           +G+    ++H        + Y ++   A++ P H SNY
Sbjct: 5   VGMYGHHSQHGTYPSDNYYNYTSDIPNAQQMPPHYSNY 42


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 273 FFSGGIFLKNVKILHTLNG 329
           F + G FL N  +LHT+ G
Sbjct: 344 FSACGFFLINGTLLHTIVG 362


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 273 FFSGGIFLKNVKILHTLNG 329
           F + G FL N  +LHT+ G
Sbjct: 169 FSACGFFLINGTLLHTIVG 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,149
Number of Sequences: 336
Number of extensions: 1923
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)