Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0394
         (429 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0033 + 546670-546885,547497-547637,548025-548291                 28   2.8  
10_08_0867 + 21159931-21160075,21160288-21160409,21160539-211606...    28   3.7  

>09_01_0033 + 546670-546885,547497-547637,548025-548291
          Length = 207

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = -2

Query: 395 PPRESITIIALCGEYMIANNRLSVQ--SMKYFDVL*KYTTREEGYLKLSLIRYN 240
           PP    + + LCGE ++A +R+SV   +      +   T R++G++++ L  ++
Sbjct: 115 PPTNKTSSLRLCGERVVATSRVSVDPAARSGASDVSYPTERDDGWMEVKLAEFS 168


>10_08_0867 +
           21159931-21160075,21160288-21160409,21160539-21160660,
           21160775-21160879,21160967-21161057,21161154-21161297,
           21161415-21161783,21161902-21162099
          Length = 431

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 127 RDLRKNDQNINQTTQFETLYQNLI 56
           RDL KNDQN     Q E +  NLI
Sbjct: 279 RDLPKNDQNTTMEEQKEVISDNLI 302


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,356,989
Number of Sequences: 37544
Number of extensions: 182261
Number of successful extensions: 313
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)