Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0392
         (746 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028843-1|ABI34224.2|  284|Drosophila melanogaster RT01106p pro...    33   0.41 
AE013599-1674|AAF58399.1|  284|Drosophila melanogaster CG4676-PA...    33   0.41 
BT016045-1|AAV36930.1|  383|Drosophila melanogaster LP19870p pro...    31   1.7  
AE014297-989|AAF54415.3|  383|Drosophila melanogaster CG8319-PA ...    31   1.7  
BT023944-1|ABB36448.1|  834|Drosophila melanogaster LD32364p pro...    30   2.9  
AE014298-2513|AAF48690.2|  834|Drosophila melanogaster CG8949-PA...    30   2.9  

>BT028843-1|ABI34224.2|  284|Drosophila melanogaster RT01106p
           protein.
          Length = 284

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 280 FGISINS-SMFLIETSRRRSFLL*YFLQILTFKWLSCKLAKVLLKPNSLHPSICKLILIM 456
           F I+ N  +  L++TS R+  L          +W SC+  + L+ P S H  +C + ++ 
Sbjct: 63  FNITSNMLACMLVDTSIRKELLKPPLDAAQLARWHSCQDCQTLVPPRSWHCEVCNVCVLK 122

Query: 457 SLARCRY 477
               CR+
Sbjct: 123 RDHHCRF 129


>AE013599-1674|AAF58399.1|  284|Drosophila melanogaster CG4676-PA
           protein.
          Length = 284

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 280 FGISINS-SMFLIETSRRRSFLL*YFLQILTFKWLSCKLAKVLLKPNSLHPSICKLILIM 456
           F I+ N  +  L++TS R+  L          +W SC+  + L+ P S H  +C + ++ 
Sbjct: 63  FNITSNMLACMLVDTSIRKELLKPPLDAAQLARWHSCQDCQTLVPPRSWHCEVCNVCVLK 122

Query: 457 SLARCRY 477
               CR+
Sbjct: 123 RDHHCRF 129


>BT016045-1|AAV36930.1|  383|Drosophila melanogaster LP19870p
           protein.
          Length = 383

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 52  PGCRXFGTRHPSNRNALLLHGRNRQGGGTYPCGLTRGPTTNKEVL 186
           P C+   TR  + +  LL+H  ++QG G + C   +    NK  L
Sbjct: 237 PHCQQAFTREQNLKAHLLIHAESKQGNGPHKCSYCQTGFFNKSAL 281


>AE014297-989|AAF54415.3|  383|Drosophila melanogaster CG8319-PA
           protein.
          Length = 383

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 52  PGCRXFGTRHPSNRNALLLHGRNRQGGGTYPCGLTRGPTTNKEVL 186
           P C+   TR  + +  LL+H  ++QG G + C   +    NK  L
Sbjct: 237 PHCQQAFTREQNLKAHLLIHAESKQGNGPHKCSYCQTGFFNKSAL 281


>BT023944-1|ABB36448.1|  834|Drosophila melanogaster LD32364p
           protein.
          Length = 834

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +1

Query: 16  PRGGGRSXLVXPPG-CRXFGTRHPS-NRNALLLHGRNRQGGGTYPCGLTRGPTTNKEVLP 189
           P GGG S    P G      + HP+ N +A +  G    GG  Y  G   GP T   +LP
Sbjct: 378 PGGGGGSNSDQPMGNALPRLSSHPTANSSASVATGTGATGGLHYGSGTGGGPVTGATMLP 437

Query: 190 PVS 198
            +S
Sbjct: 438 TMS 440


>AE014298-2513|AAF48690.2|  834|Drosophila melanogaster CG8949-PA
           protein.
          Length = 834

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +1

Query: 16  PRGGGRSXLVXPPG-CRXFGTRHPS-NRNALLLHGRNRQGGGTYPCGLTRGPTTNKEVLP 189
           P GGG S    P G      + HP+ N +A +  G    GG  Y  G   GP T   +LP
Sbjct: 378 PGGGGGSNSDQPMGNALPRLSSHPTANSSASVATGTGATGGLHYGSGTGGGPVTGATMLP 437

Query: 190 PVS 198
            +S
Sbjct: 438 TMS 440


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,762,101
Number of Sequences: 53049
Number of extensions: 782129
Number of successful extensions: 1486
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)