Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0391
         (525 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   2.9  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   3.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   5.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.8  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 292 EAGLALDNAVWYPHFTA*RWQEENQLNGINIMS 390
           E  + LD    +PHFTA R+ + N+   + +++
Sbjct: 473 EVKILLDVINHFPHFTAARFFDLNRKTILGVLN 505


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 363 VLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVEFG 232
           VLF+  +   +GV Y ++ G+SR   + +    T LAL ++  G
Sbjct: 33  VLFVIIVAGNVGVLYTLLFGRSRKSRMNY--FITHLALADLSVG 74


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 442 CAGSDGVGPLWGRLIFLGNLSFSSFPQP 525
           C+ +DG  P  GR+  LG +  +  P P
Sbjct: 29  CSDNDGFLPGQGRVNQLGGVFINGRPLP 56


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 436 CVCAGSDG 459
           CVCAGS G
Sbjct: 920 CVCAGSTG 927


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +3

Query: 237 TPHLLELSMCMSCGVQVHRGGTCP*QCSMVPPFYGITLAGREPAQWD 377
           TP   E     S  V     G  P + ++   FYG T    +PAQ D
Sbjct: 227 TPWQREYENVNSTVVNWVNAGADPGKLTIGLAFYGHTFQLADPAQHD 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,938
Number of Sequences: 336
Number of extensions: 1796
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)