Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0391
         (525 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   185   7e-49
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   1.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   1.2  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   2.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.6  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  185 bits (451), Expect = 7e-49
 Identities = 79/115 (68%), Positives = 101/115 (87%)
 Frame = -1

Query: 468 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 289
           R N +R G N+V K+VE+KKAQLV+IAHDVDPIELV++LPALCRKMGVPYCI+KGK+RLG
Sbjct: 138 RANQLRQGINSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLG 197

Query: 288 ALVHRKTCTCLALTNVEFGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKS 124
            LV+RKTCTC+ALT  E  D+ + +K+VE IKTNFN+R++++R+HWGGG+LG KS
Sbjct: 198 TLVYRKTCTCVALTQFENADKPNLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKS 252


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 258 SMCMSCGVQVHRGGTC 305
           ++C+ CG + H+ GTC
Sbjct: 572 NVCIRCGQEGHKAGTC 587


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -3

Query: 460  HHPIRHKHSHQAGREKEGAACGHRS*C*SH*AGSLPASVMP 338
            HH + H H H  G   EG   G  +   S  AG L A V P
Sbjct: 1315 HHHLHHGHHHHHG--GEGVPMGPANAAPSSPAGVLVAKVPP 1353


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 258 SMCMSCGVQVHRGGTC 305
           S+C+ CG   HR  +C
Sbjct: 311 SLCLHCGAADHRAASC 326


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 222  SFSKVVEAIKTNFNERYEELRKHWG 148
            +FS+ +     NF+  + EL++ WG
Sbjct: 1855 TFSRTIPFFGGNFSPEHTELQRTWG 1879


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 222  SFSKVVEAIKTNFNERYEELRKHWG 148
            +FS+ +     NF+  + EL++ WG
Sbjct: 1856 TFSRTIPFFGGNFSPEHTELQRTWG 1880


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,355
Number of Sequences: 2352
Number of extensions: 8905
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)