Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0388
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.15 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    26   0.35 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   4.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.5  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 11/36 (30%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 108 VVAVTRVDLLRSC-QSYNEDGEQNEQFREHFEQFSK 4
           ++ V R +L++ C + + E  E  + +++ +EQFSK
Sbjct: 397 ILKVIRKNLVKKCLELFEELAEDKDGYKKFYEQFSK 432


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 233 YFLKHLCY*FNKNILKNIMILLFISFEI 316
           Y+L H+C   +  ++ NI+ L+   FEI
Sbjct: 266 YYLSHVCQNVSTEVIGNILRLMHRRFEI 293


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 21  NVRETVHSVRRPRCSSGKT 77
           N RE+  S+ +PRC SG++
Sbjct: 85  NSRESSDSLVQPRCPSGES 103


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 632 YASWRKGGCAARRLSWVTPGVFPVT 558
           YA    GG AA   +W + G+ P T
Sbjct: 40  YALKDAGGTAADMSAWTSAGLQPTT 64


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 239 LKHLCY*FNKNILKNIMILLFISFEILI 322
           LKH+     KN+  N ++ +F S  I+I
Sbjct: 72  LKHIFNILMKNVTLNDVVFIFCSAPIII 99


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 428 RGTNHESVFLFDIFFILSL 484
           R  ++ SVFLFDI  I++L
Sbjct: 68  RSYSNFSVFLFDIITIVTL 86


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 355 NAFVFECFFFSCQLPFCECLQIRFKRY 435
           N + + C   S    +C  L+I  +RY
Sbjct: 283 NVYRYSCRDCSYATKYCHSLKIHLRRY 309


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 355 NAFVFECFFFSCQLPFCECLQIRFKRY 435
           N + + C   S    +C  L+I  +RY
Sbjct: 41  NVYRYSCRDCSYATKYCHSLKIHLRRY 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,923
Number of Sequences: 336
Number of extensions: 3211
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)