Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0388
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    25   1.8  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   9.5  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   9.5  

>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -3

Query: 693 IRPFRLRNCWEGRSVRAFSLLRQLAKRGMCCKAIKLGNARGFP 565
           +R   LRN +EG++V    LLR      +  +A KL N   FP
Sbjct: 198 LRTATLRNDFEGQAVLINCLLRNYLHYSLYDQADKLVNKSVFP 240


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -2

Query: 502 GTGPPLQTQNK 470
           GTG PL+TQNK
Sbjct: 646 GTGLPLRTQNK 656



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 69  QSYNEDGEQNEQFREHFEQFSK 4
           +S+ E  +Q  + REH+EQ  +
Sbjct: 894 KSFREKQDQLARMREHYEQIQR 915


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 330 FVDYFRFTKRLCF*VFFFLMST 395
           F +YF+F KR    + FFL  T
Sbjct: 355 FSNYFKFDKRTSQAMIFFLQMT 376


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,112
Number of Sequences: 2352
Number of extensions: 12635
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)