Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0387
(667 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26H5.10c |tif51||translation initiation factor eIF5A|Schizos... 215 4e-57
SPBC336.10c |tif512||translation initiation factor|Schizosacchar... 215 5e-57
SPAC31A2.15c |dcc1||DNA replication factor C complex subunit Dcc... 29 0.80
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.80
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 3.2
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 27 3.2
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 27 3.2
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 27 3.2
SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 27 3.2
SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 25 7.4
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 7.4
SPBC16E9.17c |rem1||meiosis-specific cyclin Rem1|Schizosaccharom... 25 9.8
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 25 9.8
>SPAC26H5.10c |tif51||translation initiation factor
eIF5A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 215 bits (526), Expect = 4e-57
Identities = 94/151 (62%), Positives = 123/151 (81%)
Frame = +2
Query: 101 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 280
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 281 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 460
V +DIFNG+KYED+ PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G
Sbjct: 61 VALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEG 119
Query: 461 DLGTQLRTDFDSGKELLCTVLKSCGEECVIA 553
+LG ++ FD G++L+ TV+ + GEE +A
Sbjct: 120 ELGNEIEEGFDEGRDLIITVVSAMGEETALA 150
>SPBC336.10c |tif512||translation initiation
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 157
Score = 215 bits (525), Expect = 5e-57
Identities = 94/151 (62%), Positives = 123/151 (81%)
Frame = +2
Query: 101 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 280
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 281 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 460
V +DIFNG+KYED+ PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G
Sbjct: 61 VALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEG 119
Query: 461 DLGTQLRTDFDSGKELLCTVLKSCGEECVIA 553
+LG ++ F+ GK+L+ TV+ + GEE +A
Sbjct: 120 ELGNEIEEGFEEGKDLIITVVSAMGEEIALA 150
>SPAC31A2.15c |dcc1||DNA replication factor C complex subunit Dcc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 349
Score = 28.7 bits (61), Expect = 0.80
Identities = 21/89 (23%), Positives = 44/89 (49%)
Frame = +2
Query: 380 TDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAGK 559
+DIS + YL L D+ L+ + P+ ++ ++DFD +LCT K+ V+
Sbjct: 18 SDISSE-YLLLELDDDLLKTLEENPEEEI--VFKSDFDKKASVLCTSDKTYAVRQVVQSN 74
Query: 560 ANTALDK*TNSAFIGVNKLFNFLQFNNSY 646
+ D+ + + ++ + ++FL+ Y
Sbjct: 75 SYLLFDELSPTDWVLNDTCYSFLEVERIY 103
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 0.80
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVYLSRAVFALPAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + V S ++ +SS P STV N S P++ S V + P + S +L SS
Sbjct: 802 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSS 861
Score = 28.7 bits (61), Expect = 0.80
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPI-NAELVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI ++ ++ S + + + S+P STV N+S P++ S + +P + S +L SS
Sbjct: 1234 TPITSSSILNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSS 1293
Score = 27.9 bits (59), Expect = 1.4
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1174 TPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSS 1233
Query: 435 RRSPLSAI 412
S+I
Sbjct: 1234 TPITSSSI 1241
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 1354 TPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 1413
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1714 TPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1773
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2194 TPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2253
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S + P + S +L SS
Sbjct: 2734 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 2793
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 1342 TPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 1401
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1486 TPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSS 1545
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2182 TPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2241
Score = 27.1 bits (57), Expect = 2.4
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVYLSRAVFALPAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + V S ++ +SS P STV N+S P++ S + P + S +L SS
Sbjct: 406 TPITSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 465
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSK-SVRN-CVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P+++ SV N P + S +L SS
Sbjct: 550 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSS 609
Score = 27.1 bits (57), Expect = 2.4
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVYLSRAVFALPAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + V S ++ +SS P STV N S P++ S + P + S +L SS
Sbjct: 1090 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 1149
Score = 26.6 bits (56), Expect = 3.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPI-NAELVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI ++ ++ S + + + S+P STV N S P++ S + + P + S +L SS
Sbjct: 754 TPITSSSILNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVLNSS 813
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S V P + S ++ SS
Sbjct: 1150 TPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1209
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S V P + S ++ SS
Sbjct: 1462 TPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1521
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVY-LSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + S + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2470 TPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2529
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVY-LSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + S + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2770 TPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2829
Score = 26.6 bits (56), Expect = 3.2
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + A+ S+P STV N+S P++ S + + + S IL SS
Sbjct: 3406 TPITSSTVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSS 3465
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAEL-VYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + + S + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 934 TPITSSTGLNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 993
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N+S P++ S V P + S ++ +S
Sbjct: 1318 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTS 1377
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S V + P + S ++ +S
Sbjct: 1438 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTS 1497
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVY-LSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + S + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1870 TPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 1929
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVY-LSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + S + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2062 TPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 2121
Score = 26.2 bits (55), Expect = 4.2
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -2
Query: 621 LKSLLTPINAELVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGI 448
L S ++ ++ S + + + S+P STV N+S P++ S + P + S +
Sbjct: 3114 LNSSTAITSSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSV 3173
Query: 447 LRSSRRSPLSAI 412
L SS S+I
Sbjct: 3174 LNSSTAITSSSI 3185
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 621 LKSLLTPINAELVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGI 448
L S ++ ++ S V + + S+P STV N+S P++ S + P + S +
Sbjct: 3342 LNSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSV 3401
Query: 447 LRSS 436
L SS
Sbjct: 3402 LNSS 3405
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S V + P + S L +S
Sbjct: 2662 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 2721
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S V + P + S L +S
Sbjct: 2890 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 2949
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S V + P + S L +S
Sbjct: 2986 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 3045
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + A+ S+P STV N+S P++ S + + P + S L +S
Sbjct: 3022 TPITSSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTS 3081
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S V + P + S L +S
Sbjct: 3250 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTS 3309
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 778 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 837
Score = 25.4 bits (53), Expect = 7.4
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVYLSRAVFALPAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + V S ++ +SS P STV N S P++ S V + P + S ++ +S
Sbjct: 1390 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTS 1449
Score = 25.4 bits (53), Expect = 7.4
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVY-LSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + S + + + S+P STV N S P++ S V + P + S ++ SS
Sbjct: 1690 TPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSS 1749
Score = 25.4 bits (53), Expect = 7.4
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVYLSRAVFALPAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + V S ++ +SS P STV N S P++ S V + P + S ++ +S
Sbjct: 2230 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTS 2289
Score = 25.4 bits (53), Expect = 7.4
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N S P++ S V + P + S L +S
Sbjct: 2254 TPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 2313
Score = 25.0 bits (52), Expect = 9.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVY-LSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + S ++ + + S+P STV N S P++ S + + P + S ++ SS
Sbjct: 1294 TPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNSS 1353
Score = 25.0 bits (52), Expect = 9.8
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 1366 TPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 1425
Score = 25.0 bits (52), Expect = 9.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 597 NAELVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
++ +V S + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1658 SSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1713
Score = 25.0 bits (52), Expect = 9.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAELVY-LSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + V S + + + S+P STV N S P++ S V + P + S L +S
Sbjct: 1990 TPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 2049
Score = 25.0 bits (52), Expect = 9.8
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 2206 TPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2265
Score = 25.0 bits (52), Expect = 9.8
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 TPINAE-LVYLSRAVFALPAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 436
TPI + +V S + + + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 2494 TPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2553
Score = 25.0 bits (52), Expect = 9.8
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 606 TPINAELVYLSRAVFALPAMTHSS-PQDFSTVHNNSLPLSKS 484
TPI + V S A ++ +SS P S+V N+S P+S S
Sbjct: 3442 TPITSSSVLNSSTAIASSSILNSSTPITSSSVLNSSTPISSS 3483
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 338 NMDVPHVKREDYQLTDISDDGYL 406
NM +P+++ E Q+ D + D YL
Sbjct: 968 NMSIPYIRGEYVQMIDANQDNYL 990
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 161 PMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK-HGHAKVHLVGIDIFNGKKY 313
P +CS ++ ++ C V G+ H H++G+D+ NG Y
Sbjct: 35 PRRCSTCKRINKRSIRCLSCHSVGCLWGHHGEEHAMEHTHMIGVDVKNGHTY 86
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 254 KHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDY 373
K A L+ D F+G ++ IC S N+ + V ED+
Sbjct: 878 KEADAYAPLLAYDKFDGDEFACICESMKNVKLDFVTLEDW 917
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 245 KTGKHGHAKVHLVGIDIFNGK-KYEDICPSTHNMDVPHVKRED 370
K G+H A +++ + N K +D CPST D+ H+ R D
Sbjct: 164 KIGQHLSAMGYVIPKEWTNTMVKLQDRCPSTSLKDIDHLFRVD 206
>SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 204
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 193 FRYAEGSSMQDC*NVHIQNRKARPR*SSLGWD 288
+ + E +Q C N+ +N +A R SS GWD
Sbjct: 41 YHHLEKGLLQQCFNLVKKNMEALYRQSSFGWD 72
>SPAC13G7.04c |mac1||membrane anchored protein Mac1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 756
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 537 RSASSPAKQTQLSTNKPTQH 596
+S SSP++ + LST+KP H
Sbjct: 286 KSESSPSRSSVLSTSKPEVH 305
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 356 VKREDYQLTDISDDGYL 406
+KREDY+LT ++ GYL
Sbjct: 91 IKREDYELTLCANCGYL 107
>SPBC16E9.17c |rem1||meiosis-specific cyclin
Rem1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 337 VCGGTDIFILFTIEDINPNQVNFSVAVLSG 248
+CG T +FI E+I+P V VL G
Sbjct: 219 LCGATALFIACKYEEIHPPTVKDLEIVLEG 248
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 25.0 bits (52), Expect = 9.8
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 438 RTSKSRMVTSAHSCVLTSTAARN--CCAPC*NPAVRSASSPAKQTQLSTNKPTQHL 599
R S+S +T H+ + T+ +R A N + RS++SPA + STN H+
Sbjct: 64 RFSRSDELTR-HARIHTNANSRRNAAAAAAANNSARSSNSPAGNLEPSTNNAGVHM 118
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,754,501
Number of Sequences: 5004
Number of extensions: 58022
Number of successful extensions: 274
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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