Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0386
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.74 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.1  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 81  CTLEMFFHVIVFASIYY 131
           CT+ + FH+I+FA + Y
Sbjct: 42  CTIVIIFHLILFAVLLY 58


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 377 LRIHSFVSIKTWKQQFS 327
           ++ H F ++K W Q FS
Sbjct: 87  MKYHFFGTLKLWSQLFS 103


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 586 WLQLNYVRDFLISFFILTFLVTFTST 509
           W Q     +F +  F +  +VT TST
Sbjct: 64  WNQFRSYSNFSVFLFDIITIVTLTST 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,214
Number of Sequences: 336
Number of extensions: 2566
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)