Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0386
         (667 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003506-1|AAO39510.1|  570|Drosophila melanogaster RE36610p pro...    29   7.5  
BT022562-1|AAY54978.2|  184|Drosophila melanogaster IP06580p pro...    28   9.9  
AE014297-4015|AAF56634.1|  184|Drosophila melanogaster CG14251-P...    28   9.9  

>BT003506-1|AAO39510.1|  570|Drosophila melanogaster RE36610p
           protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 349 LIETKL*IRNELHCRFSNTISLLINCIGLKFCYNKFTVLRFDK 477
           L+ET+  IR+ +H R  N  SLLI  +GL       +  +FDK
Sbjct: 1   LLETRYSIRSRIHARTEN--SLLIPGLGLSVTAMNRSTTQFDK 41


>BT022562-1|AAY54978.2|  184|Drosophila melanogaster IP06580p
           protein.
          Length = 184

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 203 INNNIKMQKLCLQRYKERWNYEWHVIYRCEHNNVKEHL 90
           IN+ ++ Q LCL  Y +        +YR ++NN K HL
Sbjct: 38  INSELRSQPLCLSCYTQLIQ-----LYRLKNNNAKRHL 70


>AE014297-4015|AAF56634.1|  184|Drosophila melanogaster CG14251-PA
           protein.
          Length = 184

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 203 INNNIKMQKLCLQRYKERWNYEWHVIYRCEHNNVKEHL 90
           IN+ ++ Q LCL  Y +        +YR ++NN K HL
Sbjct: 38  INSELRSQPLCLSCYTQLIQ-----LYRLKNNNAKRHL 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,907,812
Number of Sequences: 53049
Number of extensions: 359919
Number of successful extensions: 820
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)