Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0385
         (540 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113487-1|AAM29492.1|  139|Drosophila melanogaster RE46170p pro...    32   0.44 
AY071723-1|AAL49345.1|  139|Drosophila melanogaster RH38644p pro...    32   0.44 
AE013599-2945|AAF57522.1|  139|Drosophila melanogaster CG11797-P...    32   0.44 

>AY113487-1|AAM29492.1|  139|Drosophila melanogaster RE46170p
           protein.
          Length = 139

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 372 LTDEQKGNLKKHRADCLAETKADEQLVNKLKTGDF 476
           L+DEQK   K+HR  C  E K  E+   K+   DF
Sbjct: 24  LSDEQKDLAKQHREQCAEEVKLTEEEKAKVNAKDF 58


>AY071723-1|AAL49345.1|  139|Drosophila melanogaster RH38644p
           protein.
          Length = 139

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 372 LTDEQKGNLKKHRADCLAETKADEQLVNKLKTGDF 476
           L+DEQK   K+HR  C  E K  E+   K+   DF
Sbjct: 24  LSDEQKDLAKQHREQCAEEVKLTEEEKAKVNAKDF 58


>AE013599-2945|AAF57522.1|  139|Drosophila melanogaster CG11797-PA
           protein.
          Length = 139

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 372 LTDEQKGNLKKHRADCLAETKADEQLVNKLKTGDF 476
           L+DEQK   K+HR  C  E K  E+   K+   DF
Sbjct: 24  LSDEQKDLAKQHREQCAEEVKLTEEEKAKVNAKDF 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,321,208
Number of Sequences: 53049
Number of extensions: 385283
Number of successful extensions: 879
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)