Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0385
         (540 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031633-3|CAD56609.1|  545|Caenorhabditis elegans Hypothetical ...    27   6.5  
L14745-5|AAY86210.1|  119|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AL031633-3|CAD56609.1|  545|Caenorhabditis elegans Hypothetical
           protein Y39A1A.5 protein.
          Length = 545

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 319 IFVELSQSRQYILLLNRPSQMSRRGT*RNTEPTVLPRP 432
           IF E  ++   ++ L+R S  S RGT  +T+P+  P+P
Sbjct: 480 IFAEEKETADILVSLSRQSSESGRGTLTDTQPST-PQP 516


>L14745-5|AAY86210.1|  119|Caenorhabditis elegans Hypothetical
           protein C02F5.14 protein.
          Length = 119

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = -1

Query: 198 ASKNPNLISNVLDKSLVILDCTIDPTFKSNDS 103
           +SKNP + +++L  S ++  CT++  F+ + S
Sbjct: 10  SSKNPYITASILLSSFLLTSCTLEHMFEDDIS 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,284,844
Number of Sequences: 27780
Number of extensions: 208881
Number of successful extensions: 569
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)