Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0384
         (323 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    20   5.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    20   5.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    20   5.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    20   5.6  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +1

Query: 199 IVQTSYSIE*LKRFTGFPFLVKIFFYGPGWALILG 303
           +++  Y +     F G   L  +  +GP W L+ G
Sbjct: 260 VIEFQYGLSLGNAFQGGNQLANLANWGPEWNLLDG 294


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +1

Query: 199 IVQTSYSIE*LKRFTGFPFLVKIFFYGPGWALILG 303
           +++  Y +     F G   L  +  +GP W L+ G
Sbjct: 261 VIEFQYGLSLGNAFQGGNQLANLANWGPEWNLLDG 295


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +1

Query: 199 IVQTSYSIE*LKRFTGFPFLVKIFFYGPGWALILG 303
           +++  Y +     F G   L  +  +GP W L+ G
Sbjct: 261 VIEFQYGLSLGNAFQGGNQLANLANWGPEWNLLDG 295


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 68  RPISHHSSLDSFEIKIEVAVQISNHIHHFSNN 163
           RP  H+ ++ S   +     ++   +H FSNN
Sbjct: 216 RPWIHNETIYSLTPQGRKEQKVLKSLHSFSNN 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,794
Number of Sequences: 336
Number of extensions: 1403
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)