Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0384
         (323 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g09270.2 68414.m01036 importin alpha-1 subunit, putative (IMP...    28   1.2  
At1g09270.1 68414.m01035 importin alpha-1 subunit, putative (IMP...    28   1.2  
At1g16410.2 68414.m01962 cytochrome P450, putative similar to gb...    27   2.2  
At1g16410.1 68414.m01963 cytochrome P450, putative similar to gb...    27   2.2  
At4g05100.1 68417.m00758 myb family transcription factor (MYB74)...    27   2.9  
At1g06260.1 68414.m00662 cysteine proteinase, putative contains ...    27   3.8  
At1g08310.1 68414.m00917 esterase/lipase/thioesterase family pro...    26   5.0  
At2g17600.1 68415.m02036 DC1 domain-containing protein contains ...    25   8.8  

>At1g09270.2 68414.m01036 importin alpha-1 subunit, putative (IMPA4)
           similar to importin alpha-1 subunit (Karyopherin alpha-1
           subunit, KAP alpha) [Arabidopsis thaliana]
           SWISS-PROT:Q96321
          Length = 538

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 71  PISHHSSLDSFEIKIEVAVQISNHIHHFSNNYFQHYIVQMCLK 199
           P+ H      F+IK E A  ISN     S+   Q+ + Q C+K
Sbjct: 380 PLVHLLQNAEFDIKKEAAWAISNATSGGSHEQIQYLVTQGCIK 422


>At1g09270.1 68414.m01035 importin alpha-1 subunit, putative (IMPA4)
           similar to importin alpha-1 subunit (Karyopherin alpha-1
           subunit, KAP alpha) [Arabidopsis thaliana]
           SWISS-PROT:Q96321
          Length = 538

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 71  PISHHSSLDSFEIKIEVAVQISNHIHHFSNNYFQHYIVQMCLK 199
           P+ H      F+IK E A  ISN     S+   Q+ + Q C+K
Sbjct: 380 PLVHLLQNAEFDIKKEAAWAISNATSGGSHEQIQYLVTQGCIK 422


>At1g16410.2 68414.m01962 cytochrome P450, putative similar to
           gb|AF069494 cytochrome P450 from Sinapis alba and is a
           member of the PF|00067 Cytochrome P450 family
          Length = 423

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 35  ILTNLRNIFLTRPISHHSSLDSFEIKIEVA 124
           IL NL  +F+TRP S +  L   E+K ++A
Sbjct: 54  ILGNLPELFMTRPRSKYFRLAMKELKTDIA 83


>At1g16410.1 68414.m01963 cytochrome P450, putative similar to
           gb|AF069494 cytochrome P450 from Sinapis alba and is a
           member of the PF|00067 Cytochrome P450 family
          Length = 538

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 35  ILTNLRNIFLTRPISHHSSLDSFEIKIEVA 124
           IL NL  +F+TRP S +  L   E+K ++A
Sbjct: 54  ILGNLPELFMTRPRSKYFRLAMKELKTDIA 83


>At4g05100.1 68417.m00758 myb family transcription factor (MYB74)
           contains Pfam profile: PF00249 myb-like DNA-binding
           domain; identical to   cDNA putative transcription
           factor (MYB74) mRNA, partial cds GI:3941505
          Length = 324

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 71  PISHHSSLDSFEIKIEVAVQISNHIHHFSNNYFQH 175
           P++H   LD  +I   ++  I N  HH  +++ QH
Sbjct: 124 PVTHTPRLDLLDISSILSSSIYNSSHHHHHHHQQH 158


>At1g06260.1 68414.m00662 cysteine proteinase, putative contains
           similarity to thiol-protease, pre-pro-TPE4A protein
           GI:3688528 [Pisum sativum]
          Length = 343

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 248 NPVKRFNYSIE*LVCTILGTSALCNVESS 162
           N ++  N ++  L+C +L  S LC+V+SS
Sbjct: 3   NVLRNSNLTLAVLICFVLIASKLCSVDSS 31


>At1g08310.1 68414.m00917 esterase/lipase/thioesterase family
           protein contains Interpro entry IPR000379
          Length = 315

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +1

Query: 211 SYSIE*LKRFTGFPFLVK 264
           S+ IE LKR TGFP L K
Sbjct: 195 SHDIEVLKRKTGFPMLTK 212


>At2g17600.1 68415.m02036 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 580

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = +2

Query: 44  NLRNIFLTRPISHHSSLDSFEIKIEVAVQISNHIHHFSNNY--FQ-HYIV-QMCLK*CKQ 211
           N   + +T P SHH SL  F   + +  +    +     +Y  FQ +Y+V + C+   + 
Sbjct: 134 NFPTLTITNPKSHHHSLFLFPWPLLIPCEACELVSLLEPSYTCFQCNYLVHESCINLPRV 193

Query: 212 VTLSNN*NALQGSPF 256
           + ++ + + L  +PF
Sbjct: 194 IKITRHPHRLSHTPF 208


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,444,245
Number of Sequences: 28952
Number of extensions: 110087
Number of successful extensions: 237
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 360538848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)