BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0383
(633 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 27 0.65
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 27 0.65
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 3.5
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 24 4.6
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 23 6.1
AJ441131-4|CAD29633.1| 566|Anopheles gambiae putative apyrase/n... 23 6.1
AJ439398-3|CAD28126.1| 566|Anopheles gambiae putative 5' nucleo... 23 6.1
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 23 8.1
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 26.6 bits (56), Expect = 0.65
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 136 HHRVPHHHMLP 168
HH+ PHHH LP
Sbjct: 94 HHQHPHHHQLP 104
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 26.6 bits (56), Expect = 0.65
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 136 HHRVPHHHMLP 168
HH+ PHHH LP
Sbjct: 94 HHQHPHHHQLP 104
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.2 bits (50), Expect = 3.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -1
Query: 54 HHDLSLAFLHDQHLYHHA 1
HH + H HL HHA
Sbjct: 865 HHQAAAVAAHHHHLQHHA 882
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.8 bits (49), Expect = 4.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 136 HHRVPHHHML 165
HH PHHH L
Sbjct: 727 HHAAPHHHSL 736
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 23.4 bits (48), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 312 QSNGYVPSHTGYQPYEPPTADIYTQQSYSAPSSYQ 416
Q NGYV + G A Q S SA YQ
Sbjct: 377 QQNGYVSASNGQSAQAGGPAGGQAQPSQSAAQQYQ 411
>AJ441131-4|CAD29633.1| 566|Anopheles gambiae putative
apyrase/nucleotidase protein.
Length = 566
Score = 23.4 bits (48), Expect = 6.1
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -2
Query: 599 TAVCGLCCS 573
TAVCG+CC+
Sbjct: 17 TAVCGVCCA 25
>AJ439398-3|CAD28126.1| 566|Anopheles gambiae putative 5'
nucleotidase protein.
Length = 566
Score = 23.4 bits (48), Expect = 6.1
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -2
Query: 599 TAVCGLCCS 573
TAVCG+CC+
Sbjct: 17 TAVCGVCCA 25
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 23.0 bits (47), Expect = 8.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 133 SHHRVPHHH 159
SHH PHHH
Sbjct: 497 SHHAHPHHH 505
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,634
Number of Sequences: 2352
Number of extensions: 9492
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -