Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0381
         (665 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38136| Best HMM Match : COesterase (HMM E-Value=0)                  39   0.003
SB_23484| Best HMM Match : COesterase (HMM E-Value=0)                  33   0.16 
SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)              33   0.21 
SB_56819| Best HMM Match : COesterase (HMM E-Value=0)                  31   0.64 
SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)              29   2.6  
SB_24362| Best HMM Match : NOGCT (HMM E-Value=3.2)                     29   4.5  
SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.9  

>SB_38136| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 590

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
 Frame = +2

Query: 146 QFNPALRYMTGVTTQEAAYYLYNNESLAPTYAVSEHWVDERVR--ELVRRY-----NYTL 304
           +F+P   ++ G+T++E +Y+  ++     T+   E + D+ +   + VRR+     N+ L
Sbjct: 322 KFHP-YPFIAGLTSEEGSYFFSDDFFKNVTF---ETFKDDAITFYQSVRRFGREGPNFKL 377

Query: 305 NPRGVYEAVRYMYTXXXXXXXXXXXRDQYIHLLSDFLYRAPTDRLVKLLLGRRVPVYMYV 484
               + EA+ + YT           R   + +++DF   AP   ++     ++ P Y+YV
Sbjct: 378 -AASLKEAIVFHYTPWPDLGDSSGFRAALVDMVTDFSIAAPAHAVLDFH-SKQAPSYLYV 435

Query: 485 MNTTVEALRLDAWRQYPHDIKWLFLTGAPFMDQEFFPNKYRLERQAWTNNDRNLEPF 655
            +   +   +  W+   H     +  G PF+D +       L +Q + + DRN+  +
Sbjct: 436 FSHRSKNRSIPKWKGVGHKDDTPYEFGFPFLDLD-----KALTQQEYDDVDRNVSNY 487


>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 586

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 29/150 (19%), Positives = 58/150 (38%)
 Frame = +2

Query: 137 QEGQFNPALRYMTGVTTQEAAYYLYNNESLAPTYAVSEHWVDERVRELVRRYNYTLNPRG 316
           ++G F+  +  ++G  + E ++ L  N  +  T     ++    +R  +  Y+ ++  + 
Sbjct: 323 EQGDFH-RVPLLSGFVSHEGSFLL-ENARVKYTMEGMRNFAQHFLR--MEFYSNSMPDKV 378

Query: 317 VYEAVRYMYTXXXXXXXXXXXRDQYIHLLSDFLYRAPTDRLVKLLLGRRVPVYMYVMNTT 496
             +A+ + YT           R + I +LSD    APT   + L      P YM+     
Sbjct: 379 SLDALLFQYTPWLDKKDSNKIRKKMIEMLSDSFVIAPTHASLTLHSKHGAPTYMFEFTHR 438

Query: 497 VEALRLDAWRQYPHDIKWLFLTGAPFMDQE 586
               +  AW    H     +  G P +  +
Sbjct: 439 SRRHKKPAWMGVVHGDTTAYKFGVPLLSAQ 468


>SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)
          Length = 424

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 19/84 (22%), Positives = 31/84 (36%)
 Frame = +2

Query: 323 EAVRYMYTXXXXXXXXXXXRDQYIHLLSDFLYRAPTDRLVKLLLGRRVPVYMYVMNTTVE 502
           EAV++ Y            R   +   +D+++ AP       L       + YV     +
Sbjct: 303 EAVKFEYQDNKKLNDNITNRQMLMEFGTDYMFLAPAVFEAIALANAGQAPFFYVFEHLPD 362

Query: 503 ALRLDAWRQYPHDIKWLFLTGAPF 574
              +  W    H +  LF+TG PF
Sbjct: 363 FYHVGPWLSSMHGLDLLFMTGVPF 386


>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 613

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
 Frame = +2

Query: 131 MLQEGQFNPALRYMTGVTTQEAAYYLYNNESLAPTYAVSEHWVDERVRELVRRYNYTLNP 310
           M+ EGQ +P    + GV + E  ++ ++     P    S     E +       N +   
Sbjct: 376 MIAEGQVHPLDAVIVGVNSNEGGFH-WHGVMETPDSQPSVSMFKESI------VNVSFTK 428

Query: 311 RG----VYEAVRYMYTXXXXXXXXXXXRDQYIHLLSDFLYRAPTDRLVKLLLGRRVPVYM 478
           +G    V EA+ Y YT              +  L++++ + AP  R+ +  +   +P Y 
Sbjct: 429 QGDCDIVKEAIMYRYTNHTEPFSPHNLLHNWQRLVTEYRFFAPAIRMAQAYVKAGIPTYF 488

Query: 479 Y 481
           Y
Sbjct: 489 Y 489


>SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)
          Length = 1290

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 513  WTRGDSTRTT*NGCSSPERPLWTRSSFPISTGSRDRRGPITTGTLSHFL 659
            W +G    T     +S   PL T+  F  STG + +  PI TGT   F+
Sbjct: 1076 WHKGQVHPTPRAQRASSFHPLGTKGKFIPSTGHKGQVHPIPTGTKGKFI 1124


>SB_24362| Best HMM Match : NOGCT (HMM E-Value=3.2)
          Length = 273

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 326 AVRYMYTXXXXXXXXXXXRDQYIHLLSDFLYRAPTDRLVKLLLGRRVPVYMYVMN 490
           A+ Y YT              +++LL+D L+R P  ++ + L  + V VY++ +N
Sbjct: 34  ALIYEYTNWEKRDERIETLKGFLNLLTDGLFRIPALKMAEDLEKKNVSVYVFQLN 88


>SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 604

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/53 (22%), Positives = 23/53 (43%)
 Frame = +2

Query: 323 EAVRYMYTXXXXXXXXXXXRDQYIHLLSDFLYRAPTDRLVKLLLGRRVPVYMY 481
           E++ Y YT           RD YI ++ D ++ AP        + + +  ++Y
Sbjct: 392 ESILYRYTDWLNVNSPVSNRDMYIDMVGDAMFTAPAVHSADAFVKQGMKTFLY 444


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,271,771
Number of Sequences: 59808
Number of extensions: 280680
Number of successful extensions: 827
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)