Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0380
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahym...    38   0.36 
UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein PF07_0...    36   1.4  
UniRef50_A6NKE8 Cluster: Uncharacterized protein ENSP00000368828...    35   1.9  
UniRef50_Q17DC1 Cluster: Still life, putative; n=5; Endopterygot...    34   4.4  
UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma g...    33   7.7  
UniRef50_A0BWF5 Cluster: Chromosome undetermined scaffold_132, w...    33   7.7  

>UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahymena
           thermophila SB210|Rep: KOW motif family protein -
           Tetrahymena thermophila SB210
          Length = 778

 Score = 37.5 bits (83), Expect = 0.36
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 526 WNCKFVYYYDCILFFYNHKFRQDYTIKNIN 437
           + C+ ++ Y  ++F +N KFR  YT++NIN
Sbjct: 625 YQCQVIHVYKSLVFLFNPKFRDTYTVENIN 654


>UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein
           PF07_0118; n=3; Plasmodium|Rep: Putative uncharacterized
           protein PF07_0118 - Plasmodium falciparum (isolate 3D7)
          Length = 5561

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -3

Query: 523 NCKFVYYYDCILFFYNHKFRQDYTIKNINKDKQYLIYSQFDNRRQEQ 383
           N +FV  Y  I  FY++ F     I N +KD QY  YS ++N  + Q
Sbjct: 401 NIQFVLPYKPIRMFYSNNFLFFVNIINKSKDLQYFTYSIYNNNHKNQ 447


>UniRef50_A6NKE8 Cluster: Uncharacterized protein ENSP00000368828;
           n=2; Eumetazoa|Rep: Uncharacterized protein
           ENSP00000368828 - Homo sapiens (Human)
          Length = 184

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
 Frame = -2

Query: 368 IVCMRVCVKYMVC-SVCNVFFIDL----MYLLCIILKNY*HCALLLYILYKC 228
           IVC+RVC  Y+VC  VCN + + +     Y++CI + N     + ++++  C
Sbjct: 125 IVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCICIHVMILC 176


>UniRef50_Q17DC1 Cluster: Still life, putative; n=5;
           Endopterygota|Rep: Still life, putative - Aedes aegypti
           (Yellowfever mosquito)
          Length = 2068

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 1   LGERVCFLHKNERDWILYPLRDMGKHYLIA 90
           LG    F HK+  DWI YPL+ + KH + A
Sbjct: 240 LGPNEEFFHKSTTDWIQYPLKQLKKHTIDA 269


>UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1806

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = -3

Query: 532 INWNCKFVYYYDCILFFYNHKFRQDYTIKNINKDKQYLIYSQFDNRRQEQKFDNK 368
           I+  CK    YD  +++YN K ++ Y    +NK   +LIY Q+++ +      NK
Sbjct: 219 ISLECKNNIEYDNNIYYYNKKIQKFYGY--VNKQNDHLIYKQWNSYKNISTDQNK 271


>UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma
           gondii|Rep: Ribosomal protein S3 - Toxoplasma gondii
          Length = 224

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 532 INWNCKFVYYYDCILFFYNHKFRQDYTIKNINKDKQYLIYSQFDN-RRQEQKF 377
           +N   KF    +CI +FYN+  +    IK IN  K+  IY + DN    +QK+
Sbjct: 63  LNNKYKFQLNINCIFYFYNYFLKLKIFIKEINNIKR--IYKKIDNLNNLKQKY 113


>UniRef50_A0BWF5 Cluster: Chromosome undetermined scaffold_132, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_132, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1574

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 16/56 (28%), Positives = 30/56 (53%)
 Frame = -3

Query: 511  VYYYDCILFFYNHKFRQDYTIKNINKDKQYLIYSQFDNRRQEQKFDNK*YACVCAS 344
            ++YY CIL  +     Q + +KNI +  Q+  Y++    + E   DN+  +C+ A+
Sbjct: 956  IFYY-CILIIWRFLCYQRWNLKNIQQKHQHNYYTELIRCKAEINQDNQKQSCIKAT 1010


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,054,253
Number of Sequences: 1657284
Number of extensions: 13375239
Number of successful extensions: 27352
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27319
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)