Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0380
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.66 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.87 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.5  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.1  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.1  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +2

Query: 329 YIPCI*RTHACILFIVKLLFL 391
           Y P + + +AC+L +VK+L++
Sbjct: 39  YYPSLAKCYACLLMVVKILWV 59


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 87  Y*IMLTHVPQWIQNP 43
           Y + +T V QWIQNP
Sbjct: 454 YFVTMTQVIQWIQNP 468


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +2

Query: 422 ILFVFVNIFYSVVL 463
           ++F+FVN+F+ V++
Sbjct: 97  LIFIFVNVFFWVII 110


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -1

Query: 531 LIGIVSLYTITIVFYSS 481
           L+ IV+  T+TI+F++S
Sbjct: 151 LVTIVATLTVTIIFFAS 167


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -1

Query: 531 LIGIVSLYTITIVFYSS 481
           L+ IV+  T+TI+F++S
Sbjct: 151 LVTIVATLTVTIIFFAS 167


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -2

Query: 353 VCVKYMVCSVCNVFFIDLMYLLCIILKNY*HCALLLYIL 237
           +C+ Y  C++  +  I       II   + +CA  LY L
Sbjct: 283 LCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPL 321


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 481 RRIKYNRNSIQTYNSN*L*SNFDY 552
           ++++Y  ++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 481 RRIKYNRNSIQTYNSN*L*SNFDY 552
           ++++Y  ++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 19  FLHKNERDWILYPLRDM 69
           F+H+ +  W++  LR M
Sbjct: 288 FMHREDVRWVMIALRQM 304


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 481 RRIKYNRNSIQTYNSN*L*SNFDY 552
           ++++Y  ++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 481 RRIKYNRNSIQTYNSN*L*SNFDY 552
           ++++Y  ++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,957
Number of Sequences: 336
Number of extensions: 4056
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)