Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0380
         (762 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0023 + 10702040-10702364,10702530-10702747,10703643-107041...    30   1.7  

>06_02_0023 +
           10702040-10702364,10702530-10702747,10703643-10704190,
           10704272-10704523,10704611-10704721,10704812-10704893,
           10704969-10705061,10705146-10705340
          Length = 607

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/72 (22%), Positives = 32/72 (44%)
 Frame = -3

Query: 226 ENFIVLRPRNFRKKGYKVFPSRINI*IIPKFKIMSHNLQHPCLRTLLLNNAYPCPSMDTK 47
           +  +VL P ++ K  Y  F   +N+    ++K     +++P    L +   +PC    + 
Sbjct: 461 QTVVVLDPADYDKDAYMEFLCFLNL-AHGRYKKRGGYVKNPSREKLYVRGRWPCYKQPSL 519

Query: 46  SNLVRFCAKNTP 11
           +NL  +C    P
Sbjct: 520 TNLCDYCVCEMP 531


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,866,703
Number of Sequences: 37544
Number of extensions: 325178
Number of successful extensions: 525
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)