Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0380
         (762 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5878| Best HMM Match : Tyrosinase (HMM E-Value=0.33)                30   2.4  
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  

>SB_5878| Best HMM Match : Tyrosinase (HMM E-Value=0.33)
          Length = 292

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
 Frame = +2

Query: 167 RKNFVSLFTKIARTKDYE-----IFHTYREYREEVHNANNFL 277
           R+ F++ F K+ + K Y+     I   +RE+R  +H+A  FL
Sbjct: 48  RRRFIAAFKKLTKDKRYKKEYDTIVRVHREHRTMIHSARYFL 89


>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1446

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 209 KDYEIFHTYREYREEVHNANNFLK 280
           KDYEI  T+RE R E ++  N LK
Sbjct: 325 KDYEIQQTHRELRTEYNHVFNQLK 348


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,027,252
Number of Sequences: 59808
Number of extensions: 434334
Number of successful extensions: 1051
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)