Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0378
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55375-5|AAC69045.1|  126|Caenorhabditis elegans Profilin protei...    91   1e-18
AY530910-1|AAT01435.1|  126|Caenorhabditis elegans profilin-3 pr...    91   1e-18
AY530908-1|AAT01433.1|  132|Caenorhabditis elegans profilin-1 pr...    71   9e-13
AL034393-15|CAA22318.1|  132|Caenorhabditis elegans Hypothetical...    71   9e-13
U40941-2|AAA81708.3|  131|Caenorhabditis elegans Profilin protei...    67   1e-11
AY530909-1|AAT01434.1|  131|Caenorhabditis elegans profilin-2 pr...    67   1e-11
Z47812-3|CAA87790.1|  158|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>U55375-5|AAC69045.1|  126|Caenorhabditis elegans Profilin protein 3
           protein.
          Length = 126

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 46/126 (36%), Positives = 68/126 (53%)
 Frame = +3

Query: 69  MSWQDYVDKQLMASRCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 248
           MSW D ++  L+ S  V+KAAI G DG VWAKS+ F IS +E       F +   L   G
Sbjct: 1   MSWSDIINNNLIGSGNVSKAAILGFDGAVWAKSDNFNISVEEAVAAGKAFTSLDALLGTG 60

Query: 249 VTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEY 428
           + + G +++ L+  +  I  K G  G    KT QAV+IS+YE+ +QP+  +     L +Y
Sbjct: 61  LRLEGQKFLVLNADNDRIIGKQGGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADY 120

Query: 429 LITCGY 446
             +  Y
Sbjct: 121 FRSIKY 126


>AY530910-1|AAT01435.1|  126|Caenorhabditis elegans profilin-3
           protein.
          Length = 126

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 46/126 (36%), Positives = 68/126 (53%)
 Frame = +3

Query: 69  MSWQDYVDKQLMASRCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 248
           MSW D ++  L+ S  V+KAAI G DG VWAKS+ F IS +E       F +   L   G
Sbjct: 1   MSWSDIINNNLIGSGNVSKAAILGFDGAVWAKSDNFNISVEEAVAAGKAFTSLDALLGTG 60

Query: 249 VTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEY 428
           + + G +++ L+  +  I  K G  G    KT QAV+IS+YE+ +QP+  +     L +Y
Sbjct: 61  LRLEGQKFLVLNADNDRIIGKQGGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADY 120

Query: 429 LITCGY 446
             +  Y
Sbjct: 121 FRSIKY 126


>AY530908-1|AAT01433.1|  132|Caenorhabditis elegans profilin-1
           protein.
          Length = 132

 Score = 70.9 bits (166), Expect = 9e-13
 Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
 Frame = +3

Query: 75  WQDYVDKQLMASRCVTKAAIAGH-DGNVWAKSEG---FEISKDEVAKIVAGFENESLLTS 242
           W  Y+D    A+  + + AI G  DG+VWA++E    F+ S++E+   VA F + + + +
Sbjct: 4   WNAYIDTMTAAAPSIKRCAIVGAADGSVWARTEADNVFKASEEELKTFVALFNDVTQVPA 63

Query: 243 GGVTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYEEPIQ-PQQAASVVEKL 419
            G  I G  Y+     + +I  K    G   +KT+ AV+I++YE P +   Q    VE +
Sbjct: 64  KGADIEGVHYVVPRTEESLIFGKKENTGFFAVKTKSAVLIAVYEGPNEVAAQVRKAVESM 123

Query: 420 GEYLITCGY 446
             YL   GY
Sbjct: 124 QTYLNNAGY 132


>AL034393-15|CAA22318.1|  132|Caenorhabditis elegans Hypothetical
           protein Y18D10A.20 protein.
          Length = 132

 Score = 70.9 bits (166), Expect = 9e-13
 Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
 Frame = +3

Query: 75  WQDYVDKQLMASRCVTKAAIAGH-DGNVWAKSEG---FEISKDEVAKIVAGFENESLLTS 242
           W  Y+D    A+  + + AI G  DG+VWA++E    F+ S++E+   VA F + + + +
Sbjct: 4   WNAYIDTMTAAAPSIKRCAIVGAADGSVWARTEADNVFKASEEELKTFVALFNDVTQVPA 63

Query: 243 GGVTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYEEPIQ-PQQAASVVEKL 419
            G  I G  Y+     + +I  K    G   +KT+ AV+I++YE P +   Q    VE +
Sbjct: 64  KGADIEGVHYVVPRTEESLIFGKKENTGFFAVKTKSAVLIAVYEGPNEVAAQVRKAVESM 123

Query: 420 GEYLITCGY 446
             YL   GY
Sbjct: 124 QTYLNNAGY 132


>U40941-2|AAA81708.3|  131|Caenorhabditis elegans Profilin protein 2
           protein.
          Length = 131

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
 Frame = +3

Query: 75  WQDYVDKQLMASRCVTKAAIAGHDGNVWAKS---EGFEISKDEVAKIVAGFENESLLTSG 245
           W DY+      S  + +AAI G DG+VWA+S     F  ++ E+ +  A F + + +   
Sbjct: 4   WDDYIKLLFGKSPAIKRAAIIGSDGSVWARSGDANAFRATEVELKRFAALFNDINSVPGT 63

Query: 246 GVTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYE-EPIQPQQAASVVEKLG 422
           G  +    YI     + +I  K  + G    KT QA+VI++YE +  Q     + VE + 
Sbjct: 64  GADLEEIHYIVPRVEEKLIFGKKEQTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIA 123

Query: 423 EYLITCGY 446
           +YL + GY
Sbjct: 124 QYLASSGY 131


>AY530909-1|AAT01434.1|  131|Caenorhabditis elegans profilin-2
           protein.
          Length = 131

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
 Frame = +3

Query: 75  WQDYVDKQLMASRCVTKAAIAGHDGNVWAKS---EGFEISKDEVAKIVAGFENESLLTSG 245
           W DY+      S  + +AAI G DG+VWA+S     F  ++ E+ +  A F + + +   
Sbjct: 4   WDDYIKLLFGKSPAIKRAAIIGSDGSVWARSGDANAFRATEVELKRFAALFNDINSVPGT 63

Query: 246 GVTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYE-EPIQPQQAASVVEKLG 422
           G  +    YI     + +I  K  + G    KT QA+VI++YE +  Q     + VE + 
Sbjct: 64  GADLEEIHYIVPRVEEKLIFGKKEQTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIA 123

Query: 423 EYLITCGY 446
           +YL + GY
Sbjct: 124 QYLASSGY 131


>Z47812-3|CAA87790.1|  158|Caenorhabditis elegans Hypothetical
           protein T05H10.3 protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 579 LWRRNQCDEFSVHM*LFCGFWDPFYTLTVSSNNYY 683
           LWR  +C   +V+  + C F DPF T   S N  +
Sbjct: 114 LWRSGKCLNSTVNYRIGCKFDDPFETQFKSDNEIF 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,252,598
Number of Sequences: 27780
Number of extensions: 367972
Number of successful extensions: 803
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)