Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0376
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 231 7e-60
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 230 2e-59
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 210 1e-53
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 167 2e-40
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 165 5e-40
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 160 3e-38
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 149 6e-35
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 142 4e-33
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 116 3e-25
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 114 2e-24
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 109 5e-23
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 106 5e-22
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 105 8e-22
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 105 1e-21
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 104 2e-21
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 104 2e-21
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 100 3e-20
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 97 2e-19
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 69 3e-19
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 97 3e-19
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 91 1e-17
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 80 3e-14
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 79 8e-14
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 77 4e-13
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 77 4e-13
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 73 5e-12
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 72 9e-12
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 72 9e-12
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 70 5e-11
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 69 6e-11
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 69 6e-11
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 69 1e-10
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 69 1e-10
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 68 1e-10
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 62 1e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 60 3e-08
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 60 4e-08
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 60 4e-08
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 58 2e-07
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 57 3e-07
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 54 2e-06
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 53 4e-06
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 52 1e-05
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 48 1e-04
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 47 3e-04
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 46 5e-04
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 46 5e-04
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 42 0.011
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 42 0.015
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 40 0.044
UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila melanogaster... 37 0.31
UniRef50_Q08XA8 Cluster: Secretion protein HlyD, putative; n=2; ... 36 0.96
UniRef50_A7T9I2 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.3
UniRef50_A7S712 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.3
UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein ... 35 1.7
UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;... 33 3.9
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 33 3.9
UniRef50_Q2C284 Cluster: Lycopene cyclase; n=2; Vibrionaceae|Rep... 33 5.1
UniRef50_A6GTP1 Cluster: Putative transcriptional regulator; n=1... 33 5.1
UniRef50_UPI0000F1F0E1 Cluster: PREDICTED: hypothetical protein;... 33 6.7
UniRef50_UPI0000EFD0F5 Cluster: hypothetical protein An18g01440;... 33 6.7
UniRef50_A6L5Q7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A3S1A6 Cluster: Putative 4-amino-4-deoxy-L-arabinose tr... 33 6.7
UniRef50_A4HBP4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A7EUH2 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 6.7
UniRef50_UPI0000F1FF14 Cluster: PREDICTED: similar to mKIAA0909 ... 32 8.9
UniRef50_Q02E98 Cluster: Putative uncharacterized protein; n=4; ... 32 8.9
UniRef50_Q4Q6F4 Cluster: Putative uncharacterized protein; n=2; ... 32 8.9
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 231 bits (566), Expect = 7e-60
Identities = 110/141 (78%), Positives = 124/141 (87%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
MQ IR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALE+LLPHI+GNVGFVFT+ DL EVR
Sbjct: 40 MQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVR 99
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVH 534
D LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV
Sbjct: 100 DLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQ 159
Query: 535 MLKPGDKVGASEATLLNMLNM 597
++KPGDKVGASEATLLNMLNM
Sbjct: 160 LIKPGDKVGASEATLLNMLNM 180
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 56 MGREDKATWKSNYFVKIIQLLVRVPKMF 139
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCF 28
Score = 37.1 bits (82), Expect = 0.31
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +3
Query: 123 EYPKCFIVGADNVGSQQ 173
++PKCFIVGADNVGS+Q
Sbjct: 23 DFPKCFIVGADNVGSKQ 39
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 230 bits (562), Expect = 2e-59
Identities = 109/141 (77%), Positives = 124/141 (87%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
MQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+R
Sbjct: 40 MQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIR 99
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVH 534
D LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV
Sbjct: 100 DMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQ 159
Query: 535 MLKPGDKVGASEATLLNMLNM 597
++K GDKVGASEATLLNMLN+
Sbjct: 160 LIKTGDKVGASEATLLNMLNI 180
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 56 MGREDKATWKSNYFVKIIQLLVRVPKMF 139
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
Score = 38.7 bits (86), Expect = 0.10
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 123 EYPKCFIVGADNVGSQQ 173
+YPKCFIVGADNVGS+Q
Sbjct: 23 DYPKCFIVGADNVGSKQ 39
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 210 bits (514), Expect = 1e-53
Identities = 96/141 (68%), Positives = 122/141 (86%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
MQQIRISLRG + +LMGKNT +RKA++ HL+ NP LEK+LPH+KGN+GFVFT D+V++R
Sbjct: 40 MQQIRISLRGKATILMGKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIR 99
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVH 534
+ +L N+V APA+ GAIAP+ V +PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH
Sbjct: 100 EIMLSNQVGAPAKAGAIAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVH 159
Query: 535 MLKPGDKVGASEATLLNMLNM 597
++K G+KVGASEATLL ML +
Sbjct: 160 LIKIGEKVGASEATLLQMLKI 180
Score = 35.9 bits (79), Expect = 0.72
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 56 MGREDKATWKSNYFVKIIQL 115
MGREDKA WKSNY ++++ L
Sbjct: 1 MGREDKAAWKSNYVMRLLSL 20
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 167 bits (405), Expect = 2e-40
Identities = 80/143 (55%), Positives = 108/143 (75%), Gaps = 2/143 (1%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVE 348
+Q IR LRG S+VLMGKNTMM+++++ H +N N A+ LLP ++GNVG +FT+GDL E
Sbjct: 40 LQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKE 99
Query: 349 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIND 528
V +++ + KV APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 100 VSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITP 159
Query: 529 VHMLKPGDKVGASEATLLNMLNM 597
V ++K GDKVG+SEA LL L +
Sbjct: 160 VELIKQGDKVGSSEAALLAKLGI 182
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 165 bits (402), Expect = 5e-40
Identities = 80/143 (55%), Positives = 106/143 (74%), Gaps = 2/143 (1%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVE 348
+Q IR LRG S+VLMGKNTMM+++++ H D N A LLP ++GNVG +FT+GDL E
Sbjct: 41 LQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKE 100
Query: 349 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIND 528
V +++ + KV APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 101 VSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITP 160
Query: 529 VHMLKPGDKVGASEATLLNMLNM 597
V ++K GDKVG+SEA LL L +
Sbjct: 161 VELIKKGDKVGSSEAALLAKLGI 183
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 160 bits (388), Expect = 3e-38
Identities = 75/143 (52%), Positives = 105/143 (73%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVE 348
+ Q IR LRG+ +MGKNT++RKAIK+ + P LE+LLPHIKGNVGF+FT+GDL +
Sbjct: 45 SQFQTIRKELRGTCEFVMGKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQ 104
Query: 349 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIND 528
++ KL E K +PA+ G IAP V++PA +TGL P +T+F QAL+I +KI+KG IEI ++
Sbjct: 105 LKAKLTELKAPSPAKAGVIAPNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSE 164
Query: 529 VHMLKPGDKVGASEATLLNMLNM 597
++K G+KVG S+A LL L +
Sbjct: 165 TLLIKEGEKVGVSQAVLLQKLKI 187
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 149 bits (360), Expect = 6e-35
Identities = 76/144 (52%), Positives = 98/144 (68%), Gaps = 1/144 (0%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVE 348
N M +R SLRG + +LMGKNT +R A+K +L P +EKLLP +K N+GFVF + DL E
Sbjct: 38 NQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSE 97
Query: 349 VRDKLLENKVQA-PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 525
+R+ +L+NK + PAR G IAP+ V IP TG+ P TSF ++L I TKI KG IEI
Sbjct: 98 IRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQE 157
Query: 526 DVHMLKPGDKVGASEATLLNMLNM 597
VH++K G+KV AS ATLL NM
Sbjct: 158 HVHLIKQGEKVTASSATLLRKFNM 181
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 142 bits (345), Expect = 4e-33
Identities = 69/143 (48%), Positives = 98/143 (68%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVE 348
+ +Q+IR S+RG VLMGK TM+RK I+D D+ P L+ L ++K N +F + ++ E
Sbjct: 37 SQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIAE 96
Query: 349 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIND 528
V+ + +V APA+ G AP V+IPA TG+ P +TSF Q L I TKI++G I+I+N+
Sbjct: 97 VKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNE 156
Query: 529 VHMLKPGDKVGASEATLLNMLNM 597
VH++K G KVGASEATLL LN+
Sbjct: 157 VHIIKTGQKVGASEATLLQKLNI 179
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 116 bits (280), Expect = 3e-25
Identities = 63/150 (42%), Positives = 96/150 (64%), Gaps = 9/150 (6%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLPH-------IKGNVGFVF 327
+ +R LRG ++MGK T+ +K ++ ++ A +KLL + + GN +F
Sbjct: 38 VHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLYNTCIEKKLLCGNTALIF 97
Query: 328 TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKG 507
T ++ + L +++VQAPAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI+KG
Sbjct: 98 TNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKG 157
Query: 508 TIEIINDVHMLKPGDKVGASEATLLNMLNM 597
T+EI++D +L GD+V S ATLL L++
Sbjct: 158 TVEIVSDKKVLSVGDRVDNSTATLLQKLDI 187
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 114 bits (274), Expect = 2e-24
Identities = 64/139 (46%), Positives = 89/139 (64%)
Frame = +1
Query: 181 QIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDK 360
QIR LRG + +L GKNT++++ I + LD++ L+ LLP+IK NV FVFT GD +
Sbjct: 45 QIRRLLRGKAELLAGKNTIIKRVI-NQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKA 102
Query: 361 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHML 540
+ K +A A+ G +AP VVI T GP++ F+ AL I TKI+KG IEI+N V+++
Sbjct: 103 FKKTKRKAAAKAGIVAPADVVIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLI 162
Query: 541 KPGDKVGASEATLLNMLNM 597
K GD V S ATLL L +
Sbjct: 163 KKGDIVTPSHATLLQRLEI 181
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 109 bits (262), Expect = 5e-23
Identities = 59/141 (41%), Positives = 91/141 (64%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
++ I+ G++ +LMGKN+ +R+AI D P L + +KG+V FVF +G+ +++
Sbjct: 64 LKDIKRQWGGNAELLMGKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIK 121
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVH 534
+ EN +A A+ G +A V + + TG+ P+KTS+FQAL I TKI+KG +EII+
Sbjct: 122 KAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYK 181
Query: 535 MLKPGDKVGASEATLLNMLNM 597
+L GDKVG S+A LL MLN+
Sbjct: 182 VLSEGDKVGPSQANLLGMLNI 202
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 106 bits (254), Expect = 5e-22
Identities = 52/134 (38%), Positives = 81/134 (60%)
Frame = +1
Query: 196 LRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENK 375
L +SI++ GKNT+++K ++D L N+ ++L I GNV F+FT D +++ L N
Sbjct: 46 LNNTSILITGKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNS 105
Query: 376 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHMLKPGDK 555
+ A+ G +A V + T + P+ FQ+L+IPTKI KG IEII + +L+ G K
Sbjct: 106 LPTAAKIGQVAQSDVYLSQGLTNISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKK 165
Query: 556 VGASEATLLNMLNM 597
+ +EATLL LN+
Sbjct: 166 INEAEATLLQKLNI 179
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 105 bits (252), Expect = 8e-22
Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 17/158 (10%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN-----------------NPALEKLLPHI 303
+Q +R LR + +L GKNT++R +K L P LE L+P +
Sbjct: 33 LQDLRRVLRNKATILFGKNTLIRAGLKHRLTEPNAEDEDFEKRKNTWTPKPELEHLIPLL 92
Query: 304 KGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALS 483
+GNV +F ++ EV + E+KV A A+ G IAP V + TG+ P +TSFFQAL
Sbjct: 93 RGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPNDVHVYPGPTGMDPSQTSFFQALG 152
Query: 484 IPTKISKGTIEIINDVHMLKPGDKVGASEATLLNMLNM 597
I TKI KG I+I+N++H++ KVG SEA LL L +
Sbjct: 153 IFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGV 190
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 105 bits (251), Expect = 1e-21
Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 17/152 (11%)
Frame = +1
Query: 187 RISLRGSSIVLMGKNTMMRKAIKDHLDNNPA-----------------LEKLLPHIKGNV 315
RI + ++++++GKNT+ +K + + P L+ L + G V
Sbjct: 45 RILAKRNALLVIGKNTLFKKVLATRVQELPKEHEYYEDLAKFGSAIKELDALKNSVAGKV 104
Query: 316 GFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTK 495
GF+FT + +++ + ENKV+ PAR GA+AP+ VVIP TG+ P FF AL IPTK
Sbjct: 105 GFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTK 164
Query: 496 ISKGTIEIINDVHMLKPGDKVGASEATLLNML 591
I KG I+I D +LK G KVG S+A LL L
Sbjct: 165 IEKGQIQITKDFVVLKTGQKVGQSQAVLLQKL 196
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 104 bits (249), Expect = 2e-21
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 17/148 (11%)
Frame = +1
Query: 205 SSIVLMGKNTMMRKAIKDHLDNN-----------------PALEKLLPHIKGNVGFVFTR 333
+S++LMG+NT+++ A++ + P +E L+ +KGN+G +FT
Sbjct: 51 NSLMLMGENTLIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTN 110
Query: 334 GDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTI 513
DL +++D + + +APAR G++A V I A TGL P++T+FFQ L+IPTKI+K I
Sbjct: 111 HDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQI 170
Query: 514 EIINDVHMLKPGDKVGASEATLLNMLNM 597
EI D ++ G+KVG++EA LL LN+
Sbjct: 171 EISADKQIITEGEKVGSNEAALLQKLNI 198
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 104 bits (249), Expect = 2e-21
Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 16/157 (10%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIK---------DHLD-------NNPALEKLLPHIK 306
+QQIR SL ++I+++GKNT++RKA++ D P L L+PH+K
Sbjct: 42 LQQIRRSLGSNNIMVIGKNTVVRKAVQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLK 101
Query: 307 GNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSI 486
+ +VF + ++ K+ V APAR G +A V+IP TG+ P + +FF ALSI
Sbjct: 102 NKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDPSQINFFHALSI 161
Query: 487 PTKISKGTIEIINDVHMLKPGDKVGASEATLLNMLNM 597
TKI KG IEI +V + G K+G SE +LL +N+
Sbjct: 162 STKIQKGQIEITKEVQVCTKGKKIGNSEVSLLEKMNI 198
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 100 bits (239), Expect = 3e-20
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Frame = +1
Query: 169 NSMQQIRISLRGSSI-VLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLV 345
N + IR L VL GKN++MR+A+ + P + +L H+ G +FT G+
Sbjct: 39 NQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQLKEELPGIRQLEEHLYHGAGLIFTNGNFK 98
Query: 346 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 525
++D + N + + A+ GAIAP V++ T + P AL+I KI KGTIEI
Sbjct: 99 AIKDVIDANCLGSAAKVGAIAPCDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEITG 158
Query: 526 DVHMLKPGDKVGASEATLLNMLNM 597
+ ++ G KVGASEA +LN+L +
Sbjct: 159 EKQLIWEGQKVGASEANILNILGI 182
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 97.5 bits (232), Expect = 2e-19
Identities = 53/141 (37%), Positives = 76/141 (53%)
Frame = -2
Query: 597 HVQHVQKGGFRSSNLVTGLQHVYIVDDFNSTL*NLGRDRKSLEERGLLWTEAGVVGGNDD 418
+VQ VQ+ FRS++ +T + + + D+FN T NLG + +SLEER L W GV G N D
Sbjct: 147 NVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEERSLTWFHTGVDGENPD 206
Query: 417 *QWGNGTRTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGWIVVQVVFDGFAH 238
WGN T + WS + V D+ + GE E NV LD QQ W V D +
Sbjct: 207 IFWGNSTSSGWSGNLVGDDDFLDILQGIVGEDETNVTLDERQQLFVVWEVRDETSDSSSD 266
Query: 237 HCVFSHEHDTGAT*RDTDLLH 175
H V +H+ ++ A+ +D +H
Sbjct: 267 HGVLTHQDNSSASQVLSDFVH 287
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 68.9 bits (161), Expect(2) = 3e-19
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +1
Query: 241 RKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 378
++AI+ HL+ N L KLLPHIK VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 48.8 bits (111), Expect(2) = 3e-19
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1
Query: 475 ALSIPTKISKGTIEIINDVHMLKPGDKV 558
ALSIP KISKGTIEIINDV +LK GDK+
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKI 765
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 97.1 bits (231), Expect = 3e-19
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Frame = +1
Query: 175 MQQIRISLRG-SSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEV 351
+Q+IR LR +I+ M +NT+MR A+++ LD P LE LL +I+G V F+FT D ++
Sbjct: 51 LQEIRAKLRERDTIIRMSRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKL 110
Query: 352 RDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIIND 528
L E+K APA+PG IAP +V+P T P S Q +P +I G + I D
Sbjct: 111 YKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKD 170
Query: 529 VHMLKPGDKVGASEATLLNMLNM 597
++K G+++ A +L L +
Sbjct: 171 TVLVKEGEEIDEKTAEILKKLEI 193
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 91.5 bits (217), Expect = 1e-17
Identities = 51/113 (45%), Positives = 61/113 (53%)
Frame = -3
Query: 512 IVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 333
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 332 RVNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFFPMSTILEPRSEIRICCI 174
V TKPTLPL GN+FS++G + LMAL +VF P+ T P + CI
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCI 113
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 80.2 bits (189), Expect = 3e-14
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Frame = +1
Query: 178 QQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEV 351
Q R+ ++ + +NT++ AIK P LEKL+ +I G + T + ++
Sbjct: 40 QMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKL 99
Query: 352 RDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIIND 528
L +N+ APA+PGA+ P VV+PA T L P QAL IP +I KG + I D
Sbjct: 100 YKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKD 159
Query: 529 VHMLKPGDKVGASEATLLNMLNM 597
+LK G+ + A +LN L +
Sbjct: 160 TTVLKAGEVITPELANILNALGI 182
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 79.0 bits (186), Expect = 8e-14
Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
+ Q R LRG +V + +N + A++ + + ++ ++ G GF+FT + ++
Sbjct: 52 LHQYRRVLRGHGVVKVFRNKLFLIALR-RIYGDSVNAEIEKYLSGENGFIFTNENPFDLY 110
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDV 531
+++N V+ A+PG + +++PA NTG+ P S F L IPT+I G I + D
Sbjct: 111 RIIVDNSVRRYAKPGDVLQSDIIVPAGNTGINPGPVLSRFSKLKIPTQIRDGKIWVARDT 170
Query: 532 HMLKPGDKVGASEATLLNMLNM 597
+ KPGD V A LL ++N+
Sbjct: 171 QVAKPGDTVTPELADLLRLINV 192
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 76.6 bits (180), Expect = 4e-13
Identities = 40/141 (28%), Positives = 75/141 (53%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
+ IR LRG+S +++GK + + ++++ + ++ N+G +FT +L +
Sbjct: 35 IHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRWMSVKEYLSDNIGLIFTNSNLKILN 94
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVH 534
+ + + + G IA +++I L P +T FFQAL IPT+ISK +IEII D+
Sbjct: 95 ETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQALGIPTRISKSSIEIIEDIL 154
Query: 535 MLKPGDKVGASEATLLNMLNM 597
++ + S+ LL L++
Sbjct: 155 LVSKNQALNKSQEVLLKKLDI 175
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 76.6 bits (180), Expect = 4e-13
Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Frame = +1
Query: 184 IRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKL 363
+R LR S K+ + RKA+ + P ++K++ + G F+FT + L
Sbjct: 31 LRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMFMFTDISPFTLNVLL 88
Query: 364 LENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHM 537
+NK AR G IA + V +PA NTG+ GP T F +A IPTKI +GTI I+ D
Sbjct: 89 KKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWILKDTTP 147
Query: 538 LKPGDKVGASEATLLNMLNM 597
+K G+ +G A LL L++
Sbjct: 148 VKKGEPIGDKLAPLLGKLDI 167
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 72.9 bits (171), Expect = 5e-12
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Frame = +1
Query: 208 SIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 387
S++ + KNT+ A+K+ +E + H++G +FT + E+ L + K+
Sbjct: 59 SLMKVVKNTIFLLALKN---TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMRE 115
Query: 388 ARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHMLKPGDKVGA 564
AR G IA +V+PA NTG+ P S F L IPT++ +G+I I D + KPGD +
Sbjct: 116 ARAGDIATSEIVLPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISP 175
Query: 565 SEATLLNMLNM 597
A LL+ L +
Sbjct: 176 ELAELLSKLGL 186
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 72.1 bits (169), Expect = 9e-12
Identities = 40/142 (28%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
+Q +R SL ++I+ M + ++ A+++ + +E L +++G VFT+ + ++
Sbjct: 38 LQTMRKSLGDNAILKMSRKNFIKIALEN--SDKEEVEGLADYLEGQPAMVFTKMNPFKLF 95
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDV 531
L ++K +APA+ G+IAP +V+PA +T P Q + IP KI KG+I + +D
Sbjct: 96 KILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDA 155
Query: 532 HMLKPGDKVGASEATLLNMLNM 597
++ G+++ + A +L L +
Sbjct: 156 KIVDEGEEIPKAVADILTKLEI 177
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 72.1 bits (169), Expect = 9e-12
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVE 348
+Q+IR +R + M +NT++++A+++ + NP KL+ ++ V T + +
Sbjct: 44 LQEIRDKIRDQMTLKMSRNTLIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFK 103
Query: 349 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIIN 525
+ L E+K AP + GAIAP + + + +TG+ P S +A+ IP I KG I I
Sbjct: 104 LFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKE 163
Query: 526 DVHMLKPGDKVGASEATLLNMLNM 597
D + K GD + A +L+ L +
Sbjct: 164 DKVVAKEGDVISPKLAVVLSALGI 187
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 69.7 bits (163), Expect = 5e-11
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVE 348
+ + +IR LRG + + + KNT+ + A K+ +EKL ++ G F+FT+ D
Sbjct: 45 DKLHEIRKKLRGKATIKVTKNTLFKIAAKNA---GIDIEKLEQYLTGPNVFIFTK-DNPF 100
Query: 349 VRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEI 519
+ + EN K++ A PG A VVIPA +TG+ GP S F L + TK+ G + +
Sbjct: 101 ITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAGPI-LSVFGKLKVQTKVQDGKVHV 159
Query: 520 INDVHMLKPGDKVGASEATLLNMLNM 597
+ D + KPGD + A +L L +
Sbjct: 160 VKDTVVAKPGDVIPAEALPILQKLGI 185
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 69.3 bits (162), Expect = 6e-11
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Frame = +1
Query: 226 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAI 405
KN ++RKA + P +++ + G+ F+FT + ++ K+ + + APA+PG +
Sbjct: 68 KNNLVRKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDV 125
Query: 406 APLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHMLKPGDKVGASEATLL 582
A +V+PA +TGL P S F L I T + GTI I D + KPGD + A+LL
Sbjct: 126 AQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLL 185
Query: 583 NMLNM 597
L +
Sbjct: 186 QKLGI 190
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 69.3 bits (162), Expect = 6e-11
Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Frame = +1
Query: 226 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAI 405
K+ + +KA+++ + P ++ ++ KG V +FT ++ L +NK+ AR G I
Sbjct: 59 KDKVAQKALEN--SDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDI 116
Query: 406 APLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHMLKPGDKVGASEATL 579
A + VV+PA NTG+ GP T F +A IPTKI +GTI I D + G+ + A +
Sbjct: 117 ASVDVVVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWIAKDSTPVLKGEAINEKLAAI 175
Query: 580 LNMLNM 597
L L++
Sbjct: 176 LGKLDI 181
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 68.5 bits (160), Expect = 1e-10
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVE 348
N +Q++R L + + KN ++ +A+++ + E+LL G +FT + E
Sbjct: 44 NQLQKLRKKLSKKVLFRVSKNKLILRALRNAGIDTSKFEELLT---GQNLLLFTHMNAFE 100
Query: 349 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIIN 525
+ L + K + +PG IA +VIP NTGL P S F L IPT+I +I I
Sbjct: 101 LSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRIQGNSIVITR 160
Query: 526 DVHMLKPGDKVGASEATLLNMLNM 597
D + KPGD + A+LL L++
Sbjct: 161 DTVVAKPGDTISEELASLLQRLDI 184
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/142 (26%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
+Q +R L G + + M +NT++ +A+++ D L+ L +++G VG V T + +
Sbjct: 46 LQDMRRGLHGQAALRMSRNTLLVRALEEAGDG---LDTLTEYVEGEVGLVATNDNPFGLY 102
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDV 531
+L +K AP G +AP +V+P +TG+ P Q + +I +G+I++++D
Sbjct: 103 QQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDS 162
Query: 532 HMLKPGDKVGASEATLLNMLNM 597
+ + G+ V + +L+ L +
Sbjct: 163 VVTEEGETVSDDVSNVLSELGI 184
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 68.1 bits (159), Expect = 1e-10
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
+ + R LR ++ + K T+ + A PA ++ ++G VGF FT + EV
Sbjct: 50 LHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EIAEKVRGEVGFFFTSFNPAEVI 107
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDV 531
+ EN V+ A+PG AP +V+PA T P S F L IPT++ +G I I D
Sbjct: 108 KIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGKLKIPTRVQEGKIWIAKDT 167
Query: 532 HMLKPGDKVGASEATLLNMLNM 597
+ K G ++ A +L ++ +
Sbjct: 168 VVAKAGQEITPEMAEVLRVVGI 189
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +1
Query: 208 SIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 387
S+ M K+++ +A K NP L+P + GNVG +FT+GDL E +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKT---GNPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 388 ARPGAIAPLSVVIPAHNTGL 447
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 342
+S + + R S +V + K + + + H + NP L+P + GNVG + T+GDL
Sbjct: 576 HSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKGDL 635
Query: 343 VEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 447
EV ++ + KV APAR G ++ + V++P NTGL
Sbjct: 636 KEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +1
Query: 271 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 447
NP L+P + GNVG +FT+GDL EV +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 60.5 bits (140), Expect = 3e-08
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
+Q+IR +R + + + K ++ +A+K+ + A E L + + T ++ ++
Sbjct: 36 LQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALLLSTNENIFKIA 94
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIIND 528
+E+KV P + G IAP +VIP T + GP +T +AL + TK++ G IEI+ D
Sbjct: 95 KIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTKVTSGKIEIVED 153
Query: 529 VHMLKPGDKVGASEATLLNMLNM 597
++K G+ V A +L L +
Sbjct: 154 AVVVKEGEIVSPKVANVLQTLGI 176
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 60.1 bits (139), Expect = 4e-08
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGFVFTRGDL 342
N +QQIR G S + +G N +M AI + L KL P + G G +FT
Sbjct: 51 NILQQIREERAGDSRIFLGNNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFTNLSK 110
Query: 343 VEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEI 519
EV++ AR G A S+V+ P L +P K+ +G I +
Sbjct: 111 KEVKEYFATVGAPVYARTGQTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVL 170
Query: 520 INDVHMLKPGDKVGASEATLLNMLNM 597
+ D + +PGD + A A LL + +
Sbjct: 171 LQDTTVCEPGDTLSAEAAQLLKLFGV 196
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 60.1 bits (139), Expect = 4e-08
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVE 348
+ +QQIR +LRG++ V M +NT++ A+ + L + A L H +G +FT + +
Sbjct: 40 SQVQQIRRNLRGTARVKMARNTLIEHALNE-LGGSVAT--LNDHAEGQSALIFTNENPFK 96
Query: 349 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIIN 525
+ L + K + A+PG AP +VIP T P Q + IP I G ++I
Sbjct: 97 LFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQQVGIPAAIEGGKVKIRE 156
Query: 526 DVHMLKPGDKVGASEATLLNMLNM 597
++K G+ + A L L +
Sbjct: 157 TKTVVKKGEVINKKVAEALVKLGV 180
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 58.0 bits (134), Expect = 2e-07
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALE--KLLPHIKGNVGFVFTRGDL 342
+S QQ+R S++G + + MGKN +MR A+ + + + +L +KG G +FT
Sbjct: 61 SSWQQLRTSMKGYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRLLKGMTGLLFTSAPE 120
Query: 343 VEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSF-----FQALSIPTKISKG 507
+VR L AR G +A ++VIP L +K SF + L +PT +
Sbjct: 121 EKVRSALASVARPCLARGGDVATKTIVIP--QGPLDRDKYSFALEPELRKLGLPTSLQNT 178
Query: 508 TIEIINDVHMLKPGDKVGASEATLL 582
I ++ D + K GD + +++A LL
Sbjct: 179 VIHVLCDHVLCKEGDVLTSAQARLL 203
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 57.2 bits (132), Expect = 3e-07
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVE 348
+S+Q++R +L G + M +NT+ A D L ++L ++ G + V+T + +
Sbjct: 45 DSLQKMRRNLLGKVEMRMVRNTLSTIAF-DSLPEGEKAKELAKYVDGQMLIVYTNDNPFK 103
Query: 349 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIIN 525
+ L K + A+ G IAP +VIP T P FQ + IP I G + I +
Sbjct: 104 LYKLLNATKSKRAAKGGDIAPSDIVIPKGPTSFKPGPLVGEFQQVGIPAGIEGGKVVIKD 163
Query: 526 DVHMLKPGDKVGASEATLLNMLNM 597
++K G+K+ A A L L +
Sbjct: 164 TKTVVKQGEKISAKLAEALTRLEI 187
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 54.4 bits (125), Expect = 2e-06
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVE 348
+ Q++R LR S V + N + R+AI L ++ ++ L+ +I+ +F+ +
Sbjct: 43 DEFQRLRGLLRPISEVRVVNNNIARRAI---LKSDESIRPLVDYIEDQTALIFSDANPFA 99
Query: 349 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIIN 525
++ L K P + GA+AP+ +V+ + T P Q+ IP I G + I
Sbjct: 100 LKKMLDAEKRPMPIKAGAVAPVDIVVESGETSFSPGPMVGKLQSAGIPAAIKGGKVVINQ 159
Query: 526 DVHMLKPGDKVGASEATLLNMLNM 597
V + K GD + A +L ++ +
Sbjct: 160 RVVLAKQGDVITPKVAEVLKLMEI 183
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 53.2 bits (122), Expect = 4e-06
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
+Q+IR RG +++ + KN+M+ ++ + ++ I + +FT D +
Sbjct: 42 LQRIRKEFRGDALLKVSKNSMIARSF-----GGSGMNDMVDFIDDQMALIFTDLDAFALY 96
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDV 531
L + K+ AP + GA+AP+ +VI T L P Q L IP+ I G + +
Sbjct: 97 KVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGPVVGELQNLGIPSGIDGGKVVVKQRK 156
Query: 532 HMLKPGDKVGASEATLLNMLNM 597
++ G+ V A +L L +
Sbjct: 157 VAVEEGEIVSPELADMLAKLEI 178
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 51.6 bits (118), Expect = 1e-05
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Frame = +1
Query: 175 MQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
+Q+IR L+ +++ + +NT+ +A+ ++ P + + L + +FT ++
Sbjct: 45 IQKIRRDLKDVAVLKVSRNTLTERALNQLGESIPEMTRYLDN---QTALIFTNESPFKLY 101
Query: 355 DKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDV 531
L + K +P + GAIAP +++ T P Q+ IP I G + +
Sbjct: 102 KLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETK 161
Query: 532 HMLKPGDKVGASEATLLNMLNM 597
+ K G+ V AT+L+ L +
Sbjct: 162 VVCKAGEAVPQKLATMLSKLEI 183
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 48.4 bits (110), Expect = 1e-04
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 21/172 (12%)
Frame = +1
Query: 145 WV-PITWARNS-MQQIRISLRGSSIVLMGKNTMMRKAI-----KDHLDNNPALEKLLPHI 303
W+ +T RN+ +++IR +GS I MGK +M KA+ ++H +N L KLL
Sbjct: 41 WIFDVTNMRNTYLKRIRDDWKGSRI-FMGKTKVMAKALGHTPEEEHAENVSKLTKLL--- 96
Query: 304 KGNVGFVFTRGDLVEVRDKLLENKVQAP-ARPGAIAPLSVVIPA----HNTGLGPEKTSF 468
G VG +FT EV E+ VQ AR GA+AP + VIPA G P +
Sbjct: 97 HGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAVAPFTHVIPAGPVYSRAGQIPVEDDI 155
Query: 469 F---------QALSIPTKISKGTIEIINDVHMLKPGDKVGASEATLLNMLNM 597
+ L +PT + G + ++ D + G ++ + + LL + +
Sbjct: 156 LLTHTLEPQVRQLGMPTVLKNGVVTLLADFPLCTEGQQLDSRQTRLLKLFGI 207
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 47.2 bits (107), Expect = 3e-04
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGFVFTRGDL 342
N ++ +R + + S I GKN +M A+ + + L ++ H++G VG +FT
Sbjct: 58 NKLKDVRNAWKHSRI-FFGKNKVMMVALGREPSSEYRENLHQVSKHLRGEVGLLFTNRTK 116
Query: 343 VEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEI 519
EV + K AR G A +V + P + L +PT + KG + +
Sbjct: 117 EEVDEWFSSFKEVDFARAGNKATYTVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTL 176
Query: 520 INDVHMLKPGDKVGASEATLLNM 588
++D + K GD + +A +L +
Sbjct: 177 LSDYEVCKEGDILTPEQARVLKL 199
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 46.4 bits (105), Expect = 5e-04
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = -3
Query: 470 KKEVFSGPR--PVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMC 297
++ +F R PVL G T A P RAGA TL+ + S TS +SP V PTLP
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 296 GNSFSRAG--LLSRWSLMALRIIVFFPMSTILEPRS 195
G + G + S SLM I F +S I +PR+
Sbjct: 66 GTRLRKTGFPVFSARSLMD-NNISFRKISIIFKPRT 100
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 46.4 bits (105), Expect = 5e-04
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Frame = +1
Query: 184 IRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRD 357
IR + +S GKN ++ A+ + A L K +KG G +FT EV
Sbjct: 56 IRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEA 115
Query: 358 KLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVH 534
+ E + AR G +A +VV+P + + L +PTK+ KG I +
Sbjct: 116 EFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFE 175
Query: 535 MLKPGDKVGASEATLL 582
+ K G+ + +A +L
Sbjct: 176 VCKEGEPLTVEQAKIL 191
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 41.9 bits (94), Expect = 0.011
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Frame = +1
Query: 214 VLMGKNTMMRKAI-KDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 387
+L G N + A+ K H D+ P L L ++KG +FT+ E+R++L +
Sbjct: 59 LLFGINKVTVWALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEY 118
Query: 388 ARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHMLKPGDKVGA 564
RPGA A +V I + P + L +P K+ +G + + D + D +
Sbjct: 119 CRPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSEDVLSP 178
Query: 565 SEATLLNMLNM 597
+ +L + +
Sbjct: 179 EQCRILKLFQI 189
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 41.5 bits (93), Expect = 0.015
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Frame = +1
Query: 172 SMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLV 345
+ +++R + ++ +G N ++R A+ ++ + L +KG+ G +FT
Sbjct: 52 TFKEMRAATEATTTFFVGSNKVLRVALGRDAESEASEGAATLGARVKGDCGVMFTNLSRE 111
Query: 346 EVRDKLLENKVQAPARPGAIAPLSVVI---PAHN-TGLGPEKT--SFFQALSIPTKISKG 507
+V V+ AR GA+A +V + P H +G E T + +PTK+++G
Sbjct: 112 DVESVFERFAVKDYARTGALARETVTVEAGPVHGPSGALMEHTLEPTLRKNGMPTKLNRG 171
Query: 508 TIEIINDVHMLKPGDKVGASEATLLNM 588
IE+ + + K G + A LL +
Sbjct: 172 VIELEANHTLCKEGQHISPQGAILLRL 198
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 39.9 bits (89), Expect = 0.044
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +1
Query: 169 NSMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDL 342
N ++ +R L I GK + +A+ ++ A L+KL ++ G+VG +FT D
Sbjct: 51 NYLKDVRKELNDCRI-FFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDP 109
Query: 343 VEVRDKLLENKVQAPARPGAIAPLSVVIPA 432
E++D + AR G++A ++ IP+
Sbjct: 110 SEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila
melanogaster|Rep: CG3557-PA - Drosophila melanogaster
(Fruit fly)
Length = 271
Score = 37.1 bits (82), Expect = 0.31
Identities = 27/70 (38%), Positives = 37/70 (52%)
Frame = +2
Query: 176 CSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSV 355
CS S S P S +W C+KPS T +P+R CC + +A L CSP +T S
Sbjct: 85 CS-SGSSSAYPSSSAWSTC--CSKPS-TICCYPKPTR-CCASPKAPLVPCSPMDTPKSS- 138
Query: 356 TNCWRTKSKL 385
C++T S+L
Sbjct: 139 --CFKTASRL 146
>UniRef50_Q08XA8 Cluster: Secretion protein HlyD, putative; n=2;
Cystobacterineae|Rep: Secretion protein HlyD, putative -
Stigmatella aurantiaca DW4/3-1
Length = 395
Score = 35.5 bits (78), Expect = 0.96
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +1
Query: 328 TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKG 507
T+ VEV ++ K +A RPGA+ L A G K+ F A ++ +K +G
Sbjct: 283 TQSRTVEVLADIIPGKAEATLRPGALVELDFAAAAAEGDDG--KSLFLPAQAVSSKGQQG 340
Query: 508 TIEIINDVHMLKPGDKV 558
+ ++ D +LK KV
Sbjct: 341 YVWVVQDGRVLKRDVKV 357
>UniRef50_A7T9I2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 115
Score = 35.1 bits (77), Expect = 1.3
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 226 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 342
K T++RK +K HLDN P L K LP + G + + + GDL
Sbjct: 69 KVTIVRKELKSHLDNLPDLSK-LPDVDGGLAPLPSAGDL 106
>UniRef50_A7S712 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 367
Score = 35.1 bits (77), Expect = 1.3
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 226 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 342
K T++RK +K HLDN P L K LP + G + + + GDL
Sbjct: 321 KVTIVRKELKSHLDNLPDLSK-LPDVDGGLAPLPSAGDL 358
>UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein
kinase; n=8; Oryza sativa|Rep: Leucine rich repeat
containing protein kinase - Oryza sativa (Rice)
Length = 1074
Score = 34.7 bits (76), Expect = 1.7
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Frame = +1
Query: 190 ISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDK 360
I L + L+ + ++ L N AL+KL LPH ++GN+GF+ + + ++ D
Sbjct: 372 IGLLQKLVYLLLSANQLSGSVPRTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDL 431
Query: 361 LLENKVQAPARPGAIAPLSV----VIPAHN--TGLGPEKTSFFQALSI 486
+L++ A P + LS I HN G PEK S +L +
Sbjct: 432 ILDHNSFVGALPDHLGNLSARLISFIADHNKLAGSLPEKMSNLSSLEL 479
>UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 170
Score = 33.5 bits (73), Expect = 3.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +2
Query: 242 AKPSKTTWTTIQPSRNCCHTSRATLASCSP---AETSLRSVTNCWRTKS 379
A T WTT + T+ AT A+ + A ++ ++TN WRTKS
Sbjct: 102 ASTISTRWTTTAATTTTTATTAATTAAAATSTSASNAISTITNAWRTKS 150
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein
TTHERM_00070730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00070730 - Tetrahymena
thermophila SB210
Length = 5422
Score = 33.5 bits (73), Expect = 3.9
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 259 HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 354
+L NN L+KLLP I+G ++ RGDL E++
Sbjct: 831 NLANNEVLQKLLPIIEGKSLVLYERGDLKEIK 862
>UniRef50_Q2C284 Cluster: Lycopene cyclase; n=2; Vibrionaceae|Rep:
Lycopene cyclase - Photobacterium sp. SKA34
Length = 367
Score = 33.1 bits (72), Expect = 5.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 232 CFFP*ARYWSHVARYGSAAYCCEPTLSAPTMKHFGYSYQELDDLNEVVRLPSSL--VLPT 59
C F H+ Y S +YCC P ++ + Q+LD N +++ + VLPT
Sbjct: 66 CLFSSLNDKQHIHYYDSTSYCC-----LPAENYYDFCLQQLDSANVSLKMEVEVVSVLPT 120
Query: 58 H 56
H
Sbjct: 121 H 121
>UniRef50_A6GTP1 Cluster: Putative transcriptional regulator; n=1;
Limnobacter sp. MED105|Rep: Putative transcriptional
regulator - Limnobacter sp. MED105
Length = 220
Score = 33.1 bits (72), Expect = 5.1
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 439 TGLGP--EKTSFFQALSIPTKISKGTIEIINDVHMLKPGDKVGASEATLLNML 591
T +GP EK +FF+ I + S TIE +ND K GDK G L N++
Sbjct: 133 TSVGPVGEKVAFFRNSFI--EASAKTIEELNDPTKAKNGDKAGIQSVALANIM 183
>UniRef50_UPI0000F1F0E1 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 491
Score = 32.7 bits (71), Expect = 6.7
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +1
Query: 262 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 441
+ NNP + L +++GN+G++ V+V + ++ K++ A P PL + + ++
Sbjct: 307 VSNNPEGKWLARNLRGNIGYI--SNSCVDVDYEEVKRKIRGQAAPPFSPPLGLPVNDDSS 364
Query: 442 GLGPEKTSFF 471
P +SF+
Sbjct: 365 SNDPMDSSFY 374
>UniRef50_UPI0000EFD0F5 Cluster: hypothetical protein An18g01440;
n=1; Aspergillus niger|Rep: hypothetical protein
An18g01440 - Aspergillus niger
Length = 693
Score = 32.7 bits (71), Expect = 6.7
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = -3
Query: 521 MISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTST 342
+ S++P + WKKE+FS P + G T + + P +W+ + SLS T+T
Sbjct: 338 VFSLIPQHGKYAYKATWKKEIFSSPFEKV--GETVSSTFLDPVVPSSWS-GNRSLSNTTT 394
Query: 341 RSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFFPMSTILEPR 198
P + L C G S + + ++ ++++ T+ PR
Sbjct: 395 FDPSGAPRMIARLWCKVPPIDPGKASSFQIFSI-LLIWTVNVTLATPR 441
>UniRef50_A6L5Q7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 225
Score = 32.7 bits (71), Expect = 6.7
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -1
Query: 223 P*ARYWSHVARYGSAAYCCEPTLSAPTMKHFGYSYQELDDLNEVVRLPSSLVLPTHPG*C 44
P A Y + RYG +AY P++K Y YQ++ +N+ + L + PG C
Sbjct: 129 PLAVYVFDIWRYGQSAYI-------PSVKQLTYLYQQIGLVNQRIEAVGGLPISLQPGDC 181
Query: 43 GVGTS 29
+ TS
Sbjct: 182 WLWTS 186
>UniRef50_A3S1A6 Cluster: Putative 4-amino-4-deoxy-L-arabinose
transferase and related glycosyltransferase of PMT
family protein; n=1; Prochlorococcus marinus str. MIT
9211|Rep: Putative 4-amino-4-deoxy-L-arabinose
transferase and related glycosyltransferase of PMT
family protein - Prochlorococcus marinus str. MIT 9211
Length = 555
Score = 32.7 bits (71), Expect = 6.7
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 196 LRGSSIVLMG--KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEV 351
LR +++ L+G +NT +R ++ +L N +K L +KGN F+ ++ L+E+
Sbjct: 479 LRSNTVYLIGVNRNTKVRTLMEFYLPNYQDYQKSLDQVKGNSYFMVSKDALLEL 532
>UniRef50_A4HBP4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 934
Score = 32.7 bits (71), Expect = 6.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 189 YLATWLQYRAHGKKHNDAQSHQRPPGQQSSP 281
+ TWLQ+ HN Q HQ+PP + P
Sbjct: 149 HAVTWLQWEEIKALHNSEQPHQKPPARSMRP 179
>UniRef50_A7EUH2 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 272
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 195 ATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQRWLRV 326
+TW ++A GK N+A + + PG+ P E + WLR+
Sbjct: 63 STWRTFKAVGKSENNAINFENRPGKLKKPSENTRI-PSRSWLRI 105
>UniRef50_UPI0000F1FF14 Cluster: PREDICTED: similar to mKIAA0909
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
mKIAA0909 protein - Danio rerio
Length = 930
Score = 32.3 bits (70), Expect = 8.9
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -3
Query: 422 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGL 270
T ++G G + S S S +S+ P+ PT+ L GN F R GL
Sbjct: 197 TPEDGGRVEETVGVASPCSASSSSSSSSPPQTQRAPTISLSNGNGFQRGGL 247
>UniRef50_Q02E98 Cluster: Putative uncharacterized protein; n=4;
Pseudomonas aeruginosa|Rep: Putative uncharacterized
protein - Pseudomonas aeruginosa (strain UCBPP-PA14)
Length = 1174
Score = 32.3 bits (70), Expect = 8.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 198 TWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQR 314
TWL K H D Q QR P Q P A H +R
Sbjct: 183 TWLAEVVQNKVHRDEQGQQRFPPHQQRPASPPAAHPDER 221
>UniRef50_Q4Q6F4 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 646
Score = 32.3 bits (70), Expect = 8.9
Identities = 26/102 (25%), Positives = 42/102 (41%)
Frame = -3
Query: 572 ASEAPTLSPGFNMCTSLMISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPG 393
ASE T S + T + ++VP E++ + S R + GM A++P
Sbjct: 426 ASEEATGSDQTCVLTDVARNVVPLEVVPPLPNTTMPPTRSNARNFDYHGMRAAARALSPN 485
Query: 392 RAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLL 267
R W ++ + + R P P + NS +R GLL
Sbjct: 486 RPPVWV---SAPTTRAARVPLWGVPPPVAAATPNSRARKGLL 524
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,669,809
Number of Sequences: 1657284
Number of extensions: 15427592
Number of successful extensions: 48198
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 46061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48158
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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