Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0376
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   0.98 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.3  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   2.3  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    22   4.0  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   5.3  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    22   5.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   6.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.9  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   6.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.2  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 204 LQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQRWLR 323
           LQ   H  +    Q H RP  QQ   ++     Q +R LR
Sbjct: 144 LQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQEERRLR 183


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = -3

Query: 536 MCTSLMISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTD 414
           +C   ++ +  +  L      WK     GP+PV + G T D
Sbjct: 8   LCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKD 48


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 160 TLSAPTMKHFGYSYQELDDLNE 95
           T+ +  MK  G + Q +DD+NE
Sbjct: 28  TVQSVCMKEIGTAQQIIDDINE 49


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 332 RVNTKPTLPLMCGNSFSRAGLL 267
           R +T P    +CG +FSR  LL
Sbjct: 37  RTHTLPCKCHLCGKAFSRPWLL 58


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 299 CGNSFSRAGLLSRWSLMALRIIVFF-PMSTIL 207
           CG  +   GLLS   L+   I V+F P+  I+
Sbjct: 202 CGTDYFNRGLLSASYLVCYGIWVYFVPLFLII 233


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 299 CGNSFSRAGLLSRWSLMALRIIVFF-PMSTIL 207
           CG  +   GLLS   L+   I V+F P+  I+
Sbjct: 78  CGTDYFNRGLLSASYLVCYGIWVYFVPLFLII 109


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 465 FLPGSFYPYQDFKGYY*NHQ 524
           FLP S++P+Q     Y  H+
Sbjct: 311 FLPPSYHPHQHHPSQYHPHR 330


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 13/42 (30%), Positives = 16/42 (38%)
 Frame = -1

Query: 250 WLCASLCFFP*ARYWSHVARYGSAAYCCEPTLSAPTMKHFGY 125
           W+C+S   FP A  W    R         P    P  +H GY
Sbjct: 171 WICSSAISFP-AIVWWRAVRTEEV-----PEDKCPFTEHLGY 206


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 161 GLATVCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTT 271
           G  T  + SV+R   P+S SW K      PS+    T
Sbjct: 625 GERTTLTCSVTRGDLPLSISWLKDGRAMGPSERVHVT 661


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 394 DELELGLCSPTVCHGPQR 341
           D +E G+  PT C G  +
Sbjct: 361 DAVEYGIIGPTTCMGDHK 378


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +3

Query: 225 KKHNDAQSHQRPPGQQSSPRETVATHQG 308
           ++ + A S Q  PG     ++    HQG
Sbjct: 207 QQQSQAASQQSQPGMHPRQQQQAQQHQG 234


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,452
Number of Sequences: 438
Number of extensions: 4441
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)