Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0375
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070572-1|AAL48043.1|  493|Drosophila melanogaster RE11719p pro...    55   8e-08
AE014298-572|AAF45903.1|  493|Drosophila melanogaster CG15239-PA...    55   8e-08
AE013599-4024|ABC66048.1|  274|Drosophila melanogaster CG34038-P...    43   5e-04
AY069064-1|AAL39209.1|  759|Drosophila melanogaster GH07892p pro...    34   0.16 
AE014298-2573|AAF48731.1|  759|Drosophila melanogaster CG8568-PA...    34   0.16 

>AY070572-1|AAL48043.1|  493|Drosophila melanogaster RE11719p
           protein.
          Length = 493

 Score = 55.2 bits (127), Expect = 8e-08
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
 Frame = +1

Query: 232 SRNCLCKGQACVCCVNFNMTFVDVGGPGCVHMKYVSPDEGFMVKISYGKNLIHSSKIQGS 411
           S+ C C    C CC  F +  +   GPGC  + YV  DE   V + YG   + S +I   
Sbjct: 146 SKFCKCSESHCDCCRKFGLPLLP-SGPGCAKIAYVGNDE-MSVSLKYGGITLASRRISSK 203

Query: 412 NPEPICLQVFDKLAEVCAKFSELAPTSEG--IRGCLELEPR 528
              PIC+ +    ++ C K   L+ + E    + CL  E R
Sbjct: 204 RARPICVGLPGGYSKFCGKVYGLSRSKESKDFKACLAFELR 244


>AE014298-572|AAF45903.1|  493|Drosophila melanogaster CG15239-PA
           protein.
          Length = 493

 Score = 55.2 bits (127), Expect = 8e-08
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
 Frame = +1

Query: 232 SRNCLCKGQACVCCVNFNMTFVDVGGPGCVHMKYVSPDEGFMVKISYGKNLIHSSKIQGS 411
           S+ C C    C CC  F +  +   GPGC  + YV  DE   V + YG   + S +I   
Sbjct: 146 SKFCKCSESHCDCCRKFGLPLLP-SGPGCAKIAYVGNDE-MSVSLKYGGITLASRRISSK 203

Query: 412 NPEPICLQVFDKLAEVCAKFSELAPTSEG--IRGCLELEPR 528
              PIC+ +    ++ C K   L+ + E    + CL  E R
Sbjct: 204 RARPICVGLPGGYSKFCGKVYGLSRSKESKDFKACLAFELR 244


>AE013599-4024|ABC66048.1|  274|Drosophila melanogaster CG34038-PA
           protein.
          Length = 274

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
 Frame = +1

Query: 241 CLCKGQACVCCVNFNMTFVDVGGPGCVHMKYVSPDEGFMVKISYGKNLIHSSKIQGSNPE 420
           C C    C CC  F      +G   C  + Y   +  F +++    N+    K+ G NP 
Sbjct: 118 CSCDNGLCKCCAGFLSV---IGMNSCTEVAYRPEEFSFELRMRVNNNIWFRQKVSGQNPP 174

Query: 421 PICLQ-VFDKLAEVCAKFSELAPTSEGIRGCL 513
           P C +      A+ C +F ++      +  C+
Sbjct: 175 PFCFRPPRFNFAKACIQFHDIWFVGRNMHVCM 206


>AY069064-1|AAL39209.1|  759|Drosophila melanogaster GH07892p
           protein.
          Length = 759

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
 Frame = +1

Query: 241 CLCKGQACVCCVNFNMTFVDVGGPGCVHMKYVSPDEGFMVKISYGKNLIHSSKIQGSNPE 420
           C C G  C CC    +         C ++ +V   E   +++           I   NP 
Sbjct: 72  CECSGPTCGCCAGLKVDQYRFDQKVCANVSFVPHLEEAQLEVFLNGRPSSKYGISVRNPA 131

Query: 421 PICLQVFDKL-AEVCAKFSELAPTSEGIRGCLELEPRI 531
           P C+ V   +   +C + +++      +  C++   R+
Sbjct: 132 PFCIPVMMGVPMAMCVQMTDVTVVGNNLNMCMDFVVRM 169


>AE014298-2573|AAF48731.1|  759|Drosophila melanogaster CG8568-PA
           protein.
          Length = 759

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
 Frame = +1

Query: 241 CLCKGQACVCCVNFNMTFVDVGGPGCVHMKYVSPDEGFMVKISYGKNLIHSSKIQGSNPE 420
           C C G  C CC    +         C ++ +V   E   +++           I   NP 
Sbjct: 72  CECSGPTCGCCAGLKVDQYRFDQKVCANVSFVPHLEEAQLEVFLNGRPSSKYGISVRNPA 131

Query: 421 PICLQVFDKL-AEVCAKFSELAPTSEGIRGCLELEPRI 531
           P C+ V   +   +C + +++      +  C++   R+
Sbjct: 132 PFCIPVMMGVPMAMCVQMTDVTVVGNNLNMCMDFVVRM 169


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,141,567
Number of Sequences: 53049
Number of extensions: 605373
Number of successful extensions: 1272
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)