Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0374
(508 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13570.1 68418.m01568 MutT/nudix family protein similar to mR... 31 0.59
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 29 2.4
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 28 3.1
At5g49730.1 68418.m06158 ferric reductase-like transmembrane com... 27 5.5
At4g09400.1 68417.m01549 hypothetical protein similar to At3g453... 27 5.5
At3g24660.1 68416.m03096 leucine-rich repeat transmembrane prote... 27 5.5
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 27 5.5
At1g67230.1 68414.m07652 expressed protein 27 5.5
At5g54310.1 68418.m06764 ARF GAP-like zinc finger-containing pro... 27 7.3
At2g31082.1 68415.m03794 Clavata3 / ESR-Related-7 (CLE7) CLAVATA... 27 7.3
At1g49920.1 68414.m05598 zinc finger protein-related weak simila... 27 9.6
At1g10410.1 68414.m01173 expressed protein similar to ESTs gb|N9... 27 9.6
>At5g13570.1 68418.m01568 MutT/nudix family protein similar to
mRNA-decapping enzyme [Homo sapiens] GI:23268269;
contains Pfam profile PF00293: NUDIX domain
Length = 373
Score = 30.7 bits (66), Expect = 0.59
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +3
Query: 18 KCLVVLMVIGVAWAMPAAEQDSDPNILGSVLGVVKECVDGDVTLCLKEKALRYVE-TLRS 194
+CL+V G +W+ P ++ D + V E DV+ LK + Y+E R
Sbjct: 122 RCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSKLLKRE--EYIEFVFRQ 179
Query: 195 KR-EITLVDGVTLDSKGSPRSARALEPL 275
+R + +V GVT D+ +P + + + +
Sbjct: 180 QRVRLYIVAGVTEDTVFAPLTKKEISEI 207
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 273 LPEEPKAREAQVESRLVDGVADFLENYVVQFKLPSSAVE 389
+PEEP E+ +V V + +EN+ V+ SSA E
Sbjct: 674 VPEEPAVASDPEEAEIVADVGESIENHTVEENTVSSAEE 712
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +3
Query: 132 DGDVTLCLKEKALRYVETLRSKREITLVDGVTLDSKGSPRSARALEPLPEEPKAREAQVE 311
+ D LKE + + L+SK E +VD L +K + + ++ EE EA+VE
Sbjct: 57 ESDFFADLKESEKKALSDLKSKLEEAIVDNTLLKTK--KKESSPMKEKKEEVVKPEAEVE 114
Query: 312 SRLVDGVADFLE 347
+ + + +E
Sbjct: 115 KKKEEAAEEKVE 126
>At5g49730.1 68418.m06158 ferric reductase-like transmembrane
component family protein similar to ferric-chelate
reductase (FRO1) [Pisum sativum] GI:15341529; contains
Pfam profile PF01794: Ferric reductase like
transmembrane componenent
Length = 738
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 508 IPKNRGMRPM-IFSLPMAKRGRSCLIFFFLPRASSSDLL 395
+PKNR + + + L + G C++F FLP + S LL
Sbjct: 162 LPKNRSILLLEVTGLRLGMIGLLCMVFLFLPISRGSILL 200
>At4g09400.1 68417.m01549 hypothetical protein similar to At3g45350,
At2g14330
Length = 513
Score = 27.5 bits (58), Expect = 5.5
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -1
Query: 496 RGMRPMIFSLPMAKRGRSCLIFFFLPRASSSDLLMPSTAEDGSLNCTT*FSKKSATPSTS 317
R +R I S+ A+ GR +F+F SS +++ ED + T F +K+ PST
Sbjct: 285 RSIRTAI-SILRARGGRD--LFWFYTGKRSSGIVLTLGCEDRHICSTRTFHRKTTAPSTP 341
Query: 316 LD 311
D
Sbjct: 342 DD 343
>At3g24660.1 68416.m03096 leucine-rich repeat transmembrane protein
kinase, putative identical to putative kinase-like
protein TMKL1 precursor GB:P33543 from [Arabidopsis
thaliana], (Plant Mol. Biol. 23 (2), 415-421 (1993))
Length = 674
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 457 KRGRSCLIFFFLPRASSSDLLMPSTAEDGSLN 362
KRG LI+ +LP S DLL S +LN
Sbjct: 439 KRGEKLLIYDYLPNISLHDLLHESKPRKPALN 470
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 27.5 bits (58), Expect = 5.5
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 120 KECVDGDVTLCLKEKALRYVETLRSKREITLVDGVTLDSKGSPRSARALEPLPEE 284
KE VDG + KE + ETL SK E+T+ + V ++ + + PEE
Sbjct: 1115 KETVDGSREIADKEAVAKTKETLGSK-EVTVGEAVNMEVENQDEEDDDGDDDPEE 1168
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 237 KGSPRSARALEPLPEEPKAREAQVESRLVDGVADFLENYVVQFKLPSSAVEGMRRSLDEA 416
K AR L+ L E+ +ARE +LVD L++ +F+L +E R+S+D++
Sbjct: 314 KSIETKARELQALQEKLEAREKMAVQQLVDEHQAKLDSTQREFEL---EMEQKRKSIDDS 370
>At5g54310.1 68418.m06764 ARF GAP-like zinc finger-containing
protein ZIGA3 (ZIGA3) nearly identical to ARF GAP-like
zinc finger-containing protein ZIGA3 GI:10441352 from
[Arabidopsis thaliana]; contains InterPro accession
IPR001164: Human Rev interacting-like protein (hRIP)
Length = 483
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 156 KEKALRYVET-LRSKREITLVDGVTLDSKGSPRSARALEPLPEEPKAREAQ--VESRLVD 326
+E L+Y + + + V+G+T +S G P+S+ A +P P ++ + S L+D
Sbjct: 418 QENTLQYPSSSFYTMGQANQVNGMTPNSTGKPQSSSATQPTSTTPSSQSGKDFDFSSLMD 477
Query: 327 GV 332
G+
Sbjct: 478 GM 479
>At2g31082.1 68415.m03794 Clavata3 / ESR-Related-7 (CLE7)
CLAVATA3/ESR-Related 7 (CLE7)
Length = 86
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +3
Query: 99 GSVLGVVKECVDGDVTLCLKEKALRYVETLRSKREITLVDGVTLDSKGSPRSARALEPLP 278
G +L V + DG+ LK E R RE+++ + V S G P PL
Sbjct: 22 GRILRVNSKTKDGESNDLLKRLGYNVSELKRIGRELSVQNEVDRFSPGGPDPQHHSYPLS 81
Query: 279 EEPK 290
+P+
Sbjct: 82 SKPR 85
>At1g49920.1 68414.m05598 zinc finger protein-related weak
similarity to mudrA [Zea mays] GI:540581, MURAZC [Zea
mays] GI:1857256; contains Pfam profiles PF03108: MuDR
family transposase, PF04434: SWIM zinc finger
Length = 785
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +1
Query: 235 AKARPG--LPGPWSLCPRSLRPGKHRSS 312
AK +P P PWSL P + P K + S
Sbjct: 111 AKPKPNDPPPAPWSLLPMGMNPQKRQKS 138
>At1g10410.1 68414.m01173 expressed protein similar to ESTs
gb|N96021 and gb|N96863
Length = 485
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 294 REAQVESRLVDGVADFLENYVVQFKLPSSAVEG 392
+ A V SRL DG D L+++ F PSS G
Sbjct: 33 KRAAVSSRLSDGSFDNLDHHHRNFSNPSSRATG 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,825,588
Number of Sequences: 28952
Number of extensions: 166767
Number of successful extensions: 539
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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