Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0373
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.9  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 313 FFIFYFCLRYSIIGTIAS 260
           FF+  + L YSI+G + +
Sbjct: 359 FFVVDYTLLYSIVGAVTT 376


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 105 VFFSLDLFYFIYCF 64
           V ++ +LFY  +CF
Sbjct: 315 VIYTFNLFYLCFCF 328


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 105 VFFSLDLFYFIYCF 64
           V ++ +LFY  +CF
Sbjct: 271 VIYTFNLFYLCFCF 284


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 151 NSTIFTDTSKFT 116
           NST+F  T++FT
Sbjct: 262 NSTVFVPTARFT 273


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 532 LIXESLAKSLVKRAT*NCYYHPQRR 606
           LI   L  +L+   T N Y H Q+R
Sbjct: 384 LIIAPLIATLIATVTVNYYRHKQKR 408


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,824
Number of Sequences: 336
Number of extensions: 3285
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)