Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0373
         (710 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1541 - 38127014-38128022,38128116-38128209,38128302-381285...    28   6.4  
08_02_0462 + 17444726-17445135,17445271-17445546,17446523-17448461     28   8.4  

>01_06_1541 -
           38127014-38128022,38128116-38128209,38128302-38128535,
           38128643-38128744,38130893-38130956
          Length = 500

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = -2

Query: 409 CYKEW*AHN---GIFIHEDYAHPLGQTAILEWTPC 314
           CY++W A       F H +YA PLG    + +T C
Sbjct: 368 CYEKWLASRWPESAFFHREYAVPLGGGRAVRFTLC 402


>08_02_0462 + 17444726-17445135,17445271-17445546,17446523-17448461
          Length = 874

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 338 SHSRMDSVLFYFLFLPAIFDHRHNRIARYQCTRYLLGH 225
           SH+R   V  Y   LP++ + RH R+  ++  ++L  H
Sbjct: 504 SHARSLDVFCYQPKLPSLLEFRHLRVLSFRYCKWLKSH 541


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,387,763
Number of Sequences: 37544
Number of extensions: 286662
Number of successful extensions: 558
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)