Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0373
         (710 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34522-2|CAA84279.1|  894|Homo sapiens Dsc1b precursor protein.        34   0.58 
Z34522-1|CAA84278.1|  840|Homo sapiens Dsc1a precursor protein.        34   0.58 
X72925-2|CAA51429.1|  829|Homo sapiens Dsc1a precursor protein.        34   0.58 
X72925-1|CAA51428.1|  840|Homo sapiens Dsc1b precursor protein.        34   0.58 
AF293358-2|AAG23425.1|  840|Homo sapiens desmocollin 1b protein.       34   0.58 
AF293358-1|AAG23424.1|  894|Homo sapiens desmocollin 1a protein.       34   0.58 
EF452422-1|ABO21766.1|  379|Homo sapiens endonuclease EME2 protein.    32   1.8  
AK074080-1|BAB84906.2|  302|Homo sapiens FLJ00151 protein protein.     32   1.8  

>Z34522-2|CAA84279.1|  894|Homo sapiens Dsc1b precursor protein.
          Length = 894

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 197 SLKLQVRNHHGLKDTECIGI*RCDCADDRISQAEIKNKKARSPF*NGCLAQWVGIVLM 370
           S+ +Q+++ HGL  T  + +  CDC+    S+  +K+K  R    N  L +W  + ++
Sbjct: 643 SVPIQIKDRHGLVATHMLTVRVCDCSTP--SECRMKDKSTRDVRPNVILGRWAILAMV 698


>Z34522-1|CAA84278.1|  840|Homo sapiens Dsc1a precursor protein.
          Length = 840

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 197 SLKLQVRNHHGLKDTECIGI*RCDCADDRISQAEIKNKKARSPF*NGCLAQWVGIVLM 370
           S+ +Q+++ HGL  T  + +  CDC+    S+  +K+K  R    N  L +W  + ++
Sbjct: 643 SVPIQIKDRHGLVATHMLTVRVCDCSTP--SECRMKDKSTRDVRPNVILGRWAILAMV 698


>X72925-2|CAA51429.1|  829|Homo sapiens Dsc1a precursor protein.
          Length = 829

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 197 SLKLQVRNHHGLKDTECIGI*RCDCADDRISQAEIKNKKARSPF*NGCLAQWVGIVLM 370
           S+ +Q+++ HGL  T  + +  CDC+    S+  +K+K  R    N  L +W  + ++
Sbjct: 643 SVPIQIKDRHGLVATHMLTVRVCDCSTP--SECRMKDKSTRDVRPNVILGRWAILAMV 698


>X72925-1|CAA51428.1|  840|Homo sapiens Dsc1b precursor protein.
          Length = 840

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 197 SLKLQVRNHHGLKDTECIGI*RCDCADDRISQAEIKNKKARSPF*NGCLAQWVGIVLM 370
           S+ +Q+++ HGL  T  + +  CDC+    S+  +K+K  R    N  L +W  + ++
Sbjct: 643 SVPIQIKDRHGLVATHMLTVRVCDCSTP--SECRMKDKSTRDVRPNVILGRWAILAMV 698


>AF293358-2|AAG23425.1|  840|Homo sapiens desmocollin 1b protein.
          Length = 840

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 197 SLKLQVRNHHGLKDTECIGI*RCDCADDRISQAEIKNKKARSPF*NGCLAQWVGIVLM 370
           S+ +Q+++ HGL  T  + +  CDC+    S+  +K+K  R    N  L +W  + ++
Sbjct: 643 SVPIQIKDRHGLVATHMLTVRVCDCSTP--SECRMKDKSTRDVRPNVILGRWAILAMV 698


>AF293358-1|AAG23424.1|  894|Homo sapiens desmocollin 1a protein.
          Length = 894

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 197 SLKLQVRNHHGLKDTECIGI*RCDCADDRISQAEIKNKKARSPF*NGCLAQWVGIVLM 370
           S+ +Q+++ HGL  T  + +  CDC+    S+  +K+K  R    N  L +W  + ++
Sbjct: 643 SVPIQIKDRHGLVATHMLTVRVCDCSTP--SECRMKDKSTRDVRPNVILGRWAILAMV 698


>EF452422-1|ABO21766.1|  379|Homo sapiens endonuclease EME2 protein.
          Length = 379

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 139 IWLNFERLFVRSWLEMS*HIFEIASSESSWP-KRYR 243
           +W N + L V SW E+S H+  +  + + +P K+YR
Sbjct: 228 LWANLDVLLVASWQELSRHVCAVTKALAQYPLKQYR 263


>AK074080-1|BAB84906.2|  302|Homo sapiens FLJ00151 protein protein.
          Length = 302

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 139 IWLNFERLFVRSWLEMS*HIFEIASSESSWP-KRYR 243
           +W N + L V SW E+S H+  +  + + +P K+YR
Sbjct: 151 LWANLDVLLVASWQELSRHVCAVTKALAQYPLKQYR 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,769,860
Number of Sequences: 237096
Number of extensions: 1685603
Number of successful extensions: 2673
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2673
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)