Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0371
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   1.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   1.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.4  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   9.7  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 507 VHCMIPSKTRTFPKLVVSKTWIFWYFDFSVCST 409
           V  M P+K + FP  + S   + +Y  FS  ST
Sbjct: 11  VLAMTPTKEKRFPHRIHSYFMVAFYVVFSSVST 43


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 507 VHCMIPSKTRTFPKLVVSKTWIFWYFDFSVCST 409
           V  M P+K + FP  + S   + +Y  FS  ST
Sbjct: 11  VLAMTPTKEKRFPHRIHSYFMVAFYVVFSSVST 43


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 648 FHLRMFGDFPLRHLPSPPP 592
           + LR +G  P+   P PPP
Sbjct: 198 YGLRNYGPEPVPSTPYPPP 216


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/25 (28%), Positives = 18/25 (72%)
 Frame = +1

Query: 625 VAKHPQVKHIVLVEIDDRVIELSKR 699
           +A+H +V+  ++ E+ + + +LSK+
Sbjct: 12  IARHSEVQESIVAEMREVLGDLSKK 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,752
Number of Sequences: 336
Number of extensions: 4004
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)