Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0371
(703 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64231-1|AAA60574.1| 302|Homo sapiens spermidine synthase protein. 128 1e-29
M34338-1|AAA36633.1| 302|Homo sapiens spermidine synthase protein. 128 1e-29
BC033106-1|AAH33106.1| 302|Homo sapiens spermidine synthase pro... 128 1e-29
BC000309-1|AAH00309.1| 302|Homo sapiens spermidine synthase pro... 128 1e-29
AL109811-6|CAI22104.1| 302|Homo sapiens spermidine synthase pro... 128 1e-29
Z49099-1|CAA88921.1| 368|Homo sapiens spermine synthase protein. 46 1e-04
U53331-1|AAD08634.1| 349|Homo sapiens spermidine aminopropyltra... 46 1e-04
BC085621-1|AAH85621.1| 366|Homo sapiens spermine synthase protein. 46 1e-04
BC009898-1|AAH09898.1| 366|Homo sapiens spermine synthase protein. 46 1e-04
AD001528-1|AAB61308.1| 366|Homo sapiens spermidine aminopropylt... 46 1e-04
AB209417-1|BAD92654.1| 503|Homo sapiens zinc finger protein 519... 33 1.3
BC024227-1|AAH24227.1| 540|Homo sapiens zinc finger protein 519... 32 1.7
>M64231-1|AAA60574.1| 302|Homo sapiens spermidine synthase protein.
Length = 302
Score = 128 bits (310), Expect = 1e-29
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = +2
Query: 338 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKD 517
++ WF E+C +WPG S +V+++LH +S+YQ+I VF + + G VLVLDG+IQCT++D
Sbjct: 16 IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Query: 518 EFSYQEMISFLPLCCHKNPENVLIVGGGDG 607
EFSYQEMI+ LPLC H NP VLI+GGGDG
Sbjct: 76 EFSYQEMIANLPLCSHPNPRKVLIIGGGDG 105
Score = 35.1 bits (77), Expect = 0.24
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 622 EVAKHPQVKHIVLVEIDDRVIELSKRY 702
EV KHP V+ +V EID+ VI++SK++
Sbjct: 110 EVVKHPSVESVVQCEIDEDVIQVSKKF 136
>M34338-1|AAA36633.1| 302|Homo sapiens spermidine synthase protein.
Length = 302
Score = 128 bits (310), Expect = 1e-29
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = +2
Query: 338 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKD 517
++ WF E+C +WPG S +V+++LH +S+YQ+I VF + + G VLVLDG+IQCT++D
Sbjct: 16 IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Query: 518 EFSYQEMISFLPLCCHKNPENVLIVGGGDG 607
EFSYQEMI+ LPLC H NP VLI+GGGDG
Sbjct: 76 EFSYQEMIANLPLCSHPNPRKVLIIGGGDG 105
Score = 35.1 bits (77), Expect = 0.24
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 622 EVAKHPQVKHIVLVEIDDRVIELSKRY 702
EV KHP V+ +V EID+ VI++SK++
Sbjct: 110 EVVKHPSVESVVQCEIDEDVIQVSKKF 136
>BC033106-1|AAH33106.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 128 bits (310), Expect = 1e-29
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = +2
Query: 338 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKD 517
++ WF E+C +WPG S +V+++LH +S+YQ+I VF + + G VLVLDG+IQCT++D
Sbjct: 16 IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Query: 518 EFSYQEMISFLPLCCHKNPENVLIVGGGDG 607
EFSYQEMI+ LPLC H NP VLI+GGGDG
Sbjct: 76 EFSYQEMIANLPLCSHPNPRKVLIIGGGDG 105
Score = 35.1 bits (77), Expect = 0.24
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 622 EVAKHPQVKHIVLVEIDDRVIELSKRY 702
EV KHP V+ +V EID+ VI++SK++
Sbjct: 110 EVVKHPSVESVVQCEIDEDVIQVSKKF 136
>BC000309-1|AAH00309.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 128 bits (310), Expect = 1e-29
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = +2
Query: 338 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKD 517
++ WF E+C +WPG S +V+++LH +S+YQ+I VF + + G VLVLDG+IQCT++D
Sbjct: 16 IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Query: 518 EFSYQEMISFLPLCCHKNPENVLIVGGGDG 607
EFSYQEMI+ LPLC H NP VLI+GGGDG
Sbjct: 76 EFSYQEMIANLPLCSHPNPRKVLIIGGGDG 105
Score = 35.1 bits (77), Expect = 0.24
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 622 EVAKHPQVKHIVLVEIDDRVIELSKRY 702
EV KHP V+ +V EID+ VI++SK++
Sbjct: 110 EVVKHPSVESVVQCEIDEDVIQVSKKF 136
>AL109811-6|CAI22104.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 128 bits (310), Expect = 1e-29
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = +2
Query: 338 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKD 517
++ WF E+C +WPG S +V+++LH +S+YQ+I VF + + G VLVLDG+IQCT++D
Sbjct: 16 IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75
Query: 518 EFSYQEMISFLPLCCHKNPENVLIVGGGDG 607
EFSYQEMI+ LPLC H NP VLI+GGGDG
Sbjct: 76 EFSYQEMIANLPLCSHPNPRKVLIIGGGDG 105
Score = 35.1 bits (77), Expect = 0.24
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 622 EVAKHPQVKHIVLVEIDDRVIELSKRY 702
EV KHP V+ +V EID+ VI++SK++
Sbjct: 110 EVVKHPSVESVVQCEIDEDVIQVSKKF 136
>Z49099-1|CAA88921.1| 368|Homo sapiens spermine synthase protein.
Length = 368
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 374 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMIS 544
WP G +++ EV++ E S YQNI++ + G +L+L G + + D +Y I
Sbjct: 126 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 184
Query: 545 FLPLCCHKNPENVLIVGGGDG 607
+ ++VLI+GGGDG
Sbjct: 185 GSGKEDYTG-KDVLILGGGDG 204
>U53331-1|AAD08634.1| 349|Homo sapiens spermidine
aminopropyltransferase protein.
Length = 349
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 374 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMIS 544
WP G +++ EV++ E S YQNI++ + G +L+L G + + D +Y I
Sbjct: 107 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 165
Query: 545 FLPLCCHKNPENVLIVGGGDG 607
+ ++VLI+GGGDG
Sbjct: 166 GSGKEDYTG-KDVLILGGGDG 185
>BC085621-1|AAH85621.1| 366|Homo sapiens spermine synthase protein.
Length = 366
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 374 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMIS 544
WP G +++ EV++ E S YQNI++ + G +L+L G + + D +Y I
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 182
Query: 545 FLPLCCHKNPENVLIVGGGDG 607
+ ++VLI+GGGDG
Sbjct: 183 GSGKEDYTG-KDVLILGGGDG 202
>BC009898-1|AAH09898.1| 366|Homo sapiens spermine synthase protein.
Length = 366
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 374 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMIS 544
WP G +++ EV++ E S YQNI++ + G +L+L G + + D +Y I
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 182
Query: 545 FLPLCCHKNPENVLIVGGGDG 607
+ ++VLI+GGGDG
Sbjct: 183 GSGKEDYTG-KDVLILGGGDG 202
>AD001528-1|AAB61308.1| 366|Homo sapiens spermidine
aminopropyltransferase protein.
Length = 366
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 374 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMIS 544
WP G +++ EV++ E S YQNI++ + G +L+L G + + D +Y I
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 182
Query: 545 FLPLCCHKNPENVLIVGGGDG 607
+ ++VLI+GGGDG
Sbjct: 183 GSGKEDYTG-KDVLILGGGDG 202
>AB209417-1|BAD92654.1| 503|Homo sapiens zinc finger protein 519
variant protein.
Length = 503
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 225 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 112
CIP +KY++ F S N ++ F NHD + ++ S H
Sbjct: 102 CIPMNKYQHKFLKSVFCNKNQINF-NHDSNISKHHSTH 138
>BC024227-1|AAH24227.1| 540|Homo sapiens zinc finger protein 519
protein.
Length = 540
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 225 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 112
CIP +KY++ F S N ++ F NHD + ++ S H
Sbjct: 139 CIPMNKYQHKFLKSVFCNKNQINF-NHDSDISKHHSTH 175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,457,704
Number of Sequences: 237096
Number of extensions: 2309494
Number of successful extensions: 4545
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4545
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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