Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0371
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003549-1|AAO39553.1|  299|Drosophila melanogaster RE01362p pro...   144   8e-35
AE014297-991|AAF54417.1|  287|Drosophila melanogaster CG8327-PA,...   142   4e-34
AY059440-1|AAL13346.1|  217|Drosophila melanogaster GH08387p pro...    48   9e-06
AE014297-992|AAF54418.2|  217|Drosophila melanogaster CG8327-PB,...    48   9e-06
AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-P...    30   3.5  
AE013599-2060|AAM70971.1|  215|Drosophila melanogaster CG30470-P...    29   4.6  

>BT003549-1|AAO39553.1|  299|Drosophila melanogaster RE01362p
           protein.
          Length = 299

 Score =  144 bits (350), Expect = 8e-35
 Identities = 62/96 (64%), Positives = 78/96 (81%), Gaps = 1/96 (1%)
 Frame = +2

Query: 323 KKMDKLKTNWFTE-SCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGII 499
           K+MD L   WF+E   D+WPG +FS +VKEV+H EKS++Q+IQ+ +T + G+ L+LDGII
Sbjct: 11  KQMDSLNNGWFSELQADLWPGQSFSLKVKEVIHKEKSRFQDIQIVETETYGRCLILDGII 70

Query: 500 QCTQKDEFSYQEMISFLPLCCHKNPENVLIVGGGDG 607
           QCT +DEFSYQEMISFLPLC H NP+ VLIVGGGDG
Sbjct: 71  QCTARDEFSYQEMISFLPLCAHPNPKKVLIVGGGDG 106



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +1

Query: 622 EVAKHPQVKHIVLVEIDDRVIELSKRY 702
           EV KHP V+ +  VEIDDRV+ELSK+Y
Sbjct: 111 EVVKHPLVEEVHQVEIDDRVVELSKQY 137


>AE014297-991|AAF54417.1|  287|Drosophila melanogaster CG8327-PA,
           isoform A protein.
          Length = 287

 Score =  142 bits (344), Expect = 4e-34
 Identities = 61/94 (64%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
 Frame = +2

Query: 329 MDKLKTNWFTE-SCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSLGKVLVLDGIIQC 505
           MD L   WF+E   D+WPG +FS +VKEV+H EKS++Q+IQ+ +T + G+ L+LDGIIQC
Sbjct: 1   MDSLNNGWFSELQADLWPGQSFSLKVKEVIHKEKSRFQDIQIVETETYGRCLILDGIIQC 60

Query: 506 TQKDEFSYQEMISFLPLCCHKNPENVLIVGGGDG 607
           T +DEFSYQEMISFLPLC H NP+ VLIVGGGDG
Sbjct: 61  TARDEFSYQEMISFLPLCAHPNPKKVLIVGGGDG 94



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +1

Query: 622 EVAKHPQVKHIVLVEIDDRVIELSKRY 702
           EV KHP V+ +  VEIDDRV+ELSK+Y
Sbjct: 99  EVVKHPLVEEVHQVEIDDRVVELSKQY 125


>AY059440-1|AAL13346.1|  217|Drosophila melanogaster GH08387p
           protein.
          Length = 217

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +2

Query: 536 MISFLPLCCHKNPENVLIVGGGDG 607
           MISFLPLC H NP+ VLIVGGGDG
Sbjct: 1   MISFLPLCAHPNPKKVLIVGGGDG 24



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +1

Query: 622 EVAKHPQVKHIVLVEIDDRVIELSKRY 702
           EV KHP V+ +  VEIDDRV+ELSK+Y
Sbjct: 29  EVVKHPLVEEVHQVEIDDRVVELSKQY 55


>AE014297-992|AAF54418.2|  217|Drosophila melanogaster CG8327-PB,
           isoform B protein.
          Length = 217

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +2

Query: 536 MISFLPLCCHKNPENVLIVGGGDG 607
           MISFLPLC H NP+ VLIVGGGDG
Sbjct: 1   MISFLPLCAHPNPKKVLIVGGGDG 24



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +1

Query: 622 EVAKHPQVKHIVLVEIDDRVIELSKRY 702
           EV KHP V+ +  VEIDDRV+ELSK+Y
Sbjct: 29  EVVKHPLVEEVHQVEIDDRVVELSKQY 55


>AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-PA
           protein.
          Length = 1025

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -2

Query: 186 SYELNITELTFHNHDIYVQRYDSIHM 109
           +Y++N+TE+T +  DI V+  D IH+
Sbjct: 403 AYQINVTEVTENTKDIQVKTIDHIHV 428


>AE013599-2060|AAM70971.1|  215|Drosophila melanogaster CG30470-PA
           protein.
          Length = 215

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +1

Query: 328 DGQTKNQLVYGIMRYVAWGYFLIRSQRSTAHRKIKIPE--YPSF*YNQFGEGSCLGRNHT 501
           D   + +L  GI     +G   +R QRS+ HR I +PE  Y +   N  G G     N  
Sbjct: 70  DPGLRRRLFAGIRPLSVFGR--LRQQRSSQHRSISLPESNYDTL-ENMRGSGDSNNHNRP 126

Query: 502 MHSE 513
           +H++
Sbjct: 127 LHND 130


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,859,979
Number of Sequences: 53049
Number of extensions: 684795
Number of successful extensions: 1788
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1787
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)