Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0369
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a ... 144 5e-35
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical... 40 0.002
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 34 0.082
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 34 0.082
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 34 0.082
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 34 0.082
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr... 31 0.58
U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical p... 30 1.3
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 28 5.4
U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF067946-4|AAC17683.1| 345|Caenorhabditis elegans Hypothetical ... 28 7.1
AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen pro... 27 9.4
>U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a
regulatory a subunitprotein 1 protein.
Length = 590
Score = 144 bits (349), Expect = 5e-35
Identities = 66/136 (48%), Positives = 97/136 (71%)
Frame = +1
Query: 82 DTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNL 261
D SWRVRYMVA+K +E+Q +G ++ T L ++ LLKD E EVR AA ++++F +NL
Sbjct: 256 DKSWRVRYMVAEKLIEIQNVLGEDMDTTHLVNMYTNLLKDPEGEVRCAATQRLQEFALNL 315
Query: 262 DKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQL 441
+ +++II +L K+LV D NQ VKS LA VIMGL+P++G++ T+ LLP+++ L
Sbjct: 316 PEDKRQNIICNSLLNVAKELVTDGNQLVKSELAGVIMGLAPLIGKEQTVSELLPIYMQLL 375
Query: 442 KDECPEVRLNIISNLE 489
D+ PEVRLNIIS+L+
Sbjct: 376 NDQTPEVRLNIISSLD 391
Score = 44.8 bits (101), Expect = 6e-05
Identities = 33/154 (21%), Positives = 64/154 (41%)
Frame = +1
Query: 28 GTRDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSE 207
G + ++P + A D WRVR + L +G E L + L D
Sbjct: 398 GAAQLSTSLLPAIVGLAEDGKWRVRLAIVQFMPLLASQLGQEFFDEKLLPLCLNWLTDHV 457
Query: 208 AEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPI 387
+R A+ +K+ L + T I+P+++ L D N + + LS
Sbjct: 458 FSIREASTLIMKE----LTQKFGGQWASTNIVPKMQKLQKDTNYLQRMTCLFCLNTLSEA 513
Query: 388 VGRQNTIEHLLPLFLTQLKDECPEVRLNIISNLE 489
+ ++ ++ ++P+ ++D+ P VR N +L+
Sbjct: 514 MTQEQILKEIMPIVKDLVEDDVPNVRFNAAKSLK 547
Score = 34.7 bits (76), Expect = 0.062
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 127 ELQQAVGPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMN-LDKAHQEHIIMTMIL 303
EL Q G + A T++ Q L KD+ R FC+N L +A + I+ I+
Sbjct: 470 ELTQKFGGQWASTNIVPKMQKLQKDTNYLQRMTCL-----FCLNTLSEAMTQEQILKEIM 524
Query: 304 PQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVR 465
P +KDLV D +V+ A + + + + PL KD +VR
Sbjct: 525 PIVKDLVEDDVPNVRFNAAKSLKRIGKNLTPSTLTSEVKPLLEKLGKDSDFDVR 578
Score = 33.5 bits (73), Expect = 0.14
Identities = 32/141 (22%), Positives = 55/141 (39%)
Frame = +1
Query: 67 RARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVRAAAAGKVKD 246
R D + VR A K E + L L D + VR
Sbjct: 173 RTLCRDDTPMVRRAAAAKLGEFAKVFEKTAVIEGLHSSLTDLHVDEQDSVRLLTVESAIA 232
Query: 247 FCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPL 426
F LDKA+++ +I +++ +L D + V+ +A ++ + ++G HL+ +
Sbjct: 233 FGTLLDKANKKKLIEPILI----ELFDDKSWRVRYMVAEKLIEIQNVLGEDMDTTHLVNM 288
Query: 427 FLTQLKDECPEVRLNIISNLE 489
+ LKD EVR L+
Sbjct: 289 YTNLLKDPEGEVRCAATQRLQ 309
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 46 QHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVR 219
+ +MP V+ D VR+ A + + + P +++ + + L KDS+ +VR
Sbjct: 521 KEIMPIVKDLVEDDVPNVRFNAAKSLKRIGKNLTPSTLTSEVKPLLEKLGKDSDFDVR 578
>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
protein Y48G9A.1 protein.
Length = 1725
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/108 (25%), Positives = 49/108 (45%)
Frame = +1
Query: 127 ELQQAVGPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILP 306
EL + +G ++ D+ + A K E R A + + N+ K H + ++ P
Sbjct: 1015 ELVRKMGDKVIN-DILPVLDANQKSEEVAKRVGVAIALHEIIGNMSKEVTNHYLGAIVAP 1073
Query: 307 QIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDE 450
++ +CD ++ V+ A A L +VG + E + PL L QL E
Sbjct: 1074 -VRRAICDESELVREAAADTFTVLYHVVGNEALDEIICPL-LEQLTPE 1119
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 313 KDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 486
+ L D V+ +++ I ++ ++G++ T E LLP+F D+ P+VR I+ +L
Sbjct: 869 RKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHL 926
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 253 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 432
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 433 T 435
T
Sbjct: 303 T 303
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 313 KDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 486
+ L D V+ +++ I ++ ++G++ T E LLP+F D+ P+VR I+ +L
Sbjct: 995 RKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHL 1052
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 253 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 432
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 433 T 435
T
Sbjct: 303 T 303
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 313 KDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 486
+ L D V+ +++ I ++ ++G++ T E LLP+F D+ P+VR I+ +L
Sbjct: 869 RKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHL 926
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 253 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 432
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 433 T 435
T
Sbjct: 303 T 303
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 313 KDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 486
+ L D V+ +++ I ++ ++G++ T E LLP+F D+ P+VR I+ +L
Sbjct: 995 RKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHL 1052
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 253 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 432
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 433 T 435
T
Sbjct: 303 T 303
>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical
protein B0024.8 protein.
Length = 1185
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 367 IMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVR 465
I G S I+ QN + ++LP+ L +D+ P+VR
Sbjct: 853 IQGSSAILNNQNALSNVLPVLLQFSRDQSPQVR 885
>U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical
protein ZK1248.10 protein.
Length = 908
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 247 FCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKS--ALASVIMG-LSPIVGRQNTIEHL 417
F + L K + H++ + + + A +H+ +LA V L+P Q TIE
Sbjct: 836 FALALFKICEPHVLQCKTIGTVHQCLSKAQEHIIDFKSLAQVAFNELNPFP--QKTIETK 893
Query: 418 LPLFLTQLKD 447
L+LTQLKD
Sbjct: 894 RQLYLTQLKD 903
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 253 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 432
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 433 T 435
T
Sbjct: 303 T 303
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 253 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 432
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 433 T 435
T
Sbjct: 303 T 303
>U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical
protein C49C8.1 protein.
Length = 517
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 82 DTSWRVRYMVADKFVELQQAVGPELARTDL 171
D W + YMVA+ FVEL E+A +L
Sbjct: 295 DDIWSLMYMVAEFFVELPWTSNEEIALEEL 324
>AF067946-4|AAC17683.1| 345|Caenorhabditis elegans Hypothetical
protein W02G9.3 protein.
Length = 345
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +1
Query: 118 KFVELQQAVGPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTM 297
+F++ V LA DL+++ + L+K ++A GK+ + + + + +
Sbjct: 226 RFLQRVYPVEHTLA-VDLSKMNEVLMKVISDTLKADGTGKLPTYSVEFKARNNDSVAKNS 284
Query: 298 ILPQIKDLVC 327
+L + D VC
Sbjct: 285 VLQMVDDAVC 294
>AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen
protein 56 protein.
Length = 321
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 114 SDHVPHPPRSISGTSPHGRHHMLLHISGASREAT 13
SD +P PP I P+G ++ + A RE T
Sbjct: 152 SDGIPGPPGLIGPPGPNGESGVIGSVGAAGREGT 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,235,290
Number of Sequences: 27780
Number of extensions: 337170
Number of successful extensions: 921
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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