Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0369
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   2.7  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    22   6.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.3  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    22   6.3  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   8.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.3  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 304 PQIKDLVCDANQHVKSALASVIMGLSPIVG 393
           PQ+ D+   +N  +  AL +  +  SP++G
Sbjct: 24  PQLTDVCSASNGELFLALLNFFVATSPVIG 53


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 598 ALQHIPLSPAGVIAKRPAPIALSNSC 675
           AL   P  P G   K  AP+ L  +C
Sbjct: 55  ALGEAPCDPVGRRLKSLAPLVLRGAC 80


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -2

Query: 166 LYELALDQQLVAALRTYQRPCTAPSTKYLRHEPARSASHV 47
           LYELAL+Q +   LR         + K L+++  +   ++
Sbjct: 317 LYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEMEYL 356


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 566 SHDVVKRRPVNCNTTHYRANWVPGP 492
           S +  K++P +C+T  YR   V  P
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTP 584


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 598 ALQHIPLSPAGVIAKRPAPIALSNSC 675
           AL   P  P G   K  AP+ L  +C
Sbjct: 55  ALGEAPCDPVGRRLKSLAPLVLRGAC 80


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 105 VPHPPRSISGT 73
           VP PPRS+ G+
Sbjct: 56  VPQPPRSLEGS 66


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 324 HQVLDLWQDHGHDDVFLMSFIQVHT 250
           HQ+  L Q H      L SF+Q H+
Sbjct: 72  HQMQQLLQQHILSPTQLQSFMQQHS 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,657
Number of Sequences: 438
Number of extensions: 4149
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)