Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0368
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 105 4e-23
08_01_0788 + 7617929-7617969,7619848-7621622,7635250-7635437 31 0.74
11_01_0809 + 7201431-7202243,7202646-7203347,7216678-7216755 31 0.97
08_02_0838 - 21662721-21662759,21672016-21673355,21673566-21674505 31 0.97
06_01_1156 + 9788711-9788759,9788910-9789142,9790146-9791919,981... 31 0.97
05_05_0178 - 23007705-23007722,23007770-23008582,23010227-23010274 31 0.97
05_02_0002 - 5476472-5476485,5486918-5488655 31 0.97
04_04_0356 - 24658223-24660613 31 0.97
03_01_0614 + 4515515-4515540,4515988-4516209,4516681-4516768,451... 31 0.97
09_02_0213 - 5842150-5842261,5842729-5842925 30 1.3
12_02_0417 - 18896949-18897269,18897340-18897424,18899561-188996... 30 1.7
10_02_0180 + 6292190-6292654,6293923-6294915 30 1.7
07_03_0375 + 17408815-17409035,17422820-17423477,17423780-174241... 30 1.7
08_02_0204 - 14253258-14253383,14253685-14253878,14254029-142547... 29 3.0
11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,961... 29 3.9
07_03_0482 + 18589573-18589728,18589889-18590065,18590518-185906... 29 3.9
04_03_0245 - 13331603-13332111,13332653-13333025 29 3.9
01_07_0353 + 42962769-42962972,42963062-42963138,42963571-429638... 29 3.9
11_04_0166 + 14317129-14317962,14318042-14318809,14319008-143197... 28 5.2
05_03_0205 - 10012256-10012588,10012676-10012826,10012909-100131... 28 6.9
03_05_0086 - 20642873-20643033,20643384-20643504,20643698-206437... 28 6.9
12_02_0098 + 13592581-13593120,13595729-13596668,13596879-135975... 27 9.1
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 105 bits (251), Expect = 4e-23
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
Frame = +2
Query: 101 TEYWVISAPGD---KTCQQTWDTLNNATKSGNLSVN-YKFPIPDLKVGTLDQLVGLSDDL 268
T YW++S P T W L ++ + Y+F +PDL+VGTLD L+ LSDDL
Sbjct: 3 TRYWIVSLPVQTPGSTANSLWARLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLALSDDL 62
Query: 269 GKLDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSL 448
K + F+EGV+ K+ + + E LE L + + TYLTRF WD KYP L
Sbjct: 63 VKSNVFIEGVSHKIRRQI-EELERAGGVESGALTVDGVPVDTYLTRFVWDEGKYPTMSPL 121
Query: 449 RNIADIISKQVGQIDADLKVKSFAYNAFKGNL 544
+ I I QV +I+ D+KV+ YN + L
Sbjct: 122 KEIVGSIQSQVSKIEDDMKVRGAEYNNVRSQL 153
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 552 LEKKQTGSLLTRNLADLVKKE 614
+ +KQTGSL R+L++LVK E
Sbjct: 156 INRKQTGSLAVRDLSNLVKPE 176
>08_01_0788 + 7617929-7617969,7619848-7621622,7635250-7635437
Length = 667
Score = 31.1 bits (67), Expect = 0.74
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DDLG++ D+ + + K A L ++LED R L+ + L T L QW
Sbjct: 130 VADDLGQMLQDSREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 185
>11_01_0809 + 7201431-7202243,7202646-7203347,7216678-7216755
Length = 530
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 171
>08_02_0838 - 21662721-21662759,21672016-21673355,21673566-21674505
Length = 772
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 171
>06_01_1156 +
9788711-9788759,9788910-9789142,9790146-9791919,
9819418-9819743
Length = 793
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 210 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 265
>05_05_0178 - 23007705-23007722,23007770-23008582,23010227-23010274
Length = 292
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 132 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 187
>05_02_0002 - 5476472-5476485,5486918-5488655
Length = 583
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 171
>04_04_0356 - 24658223-24660613
Length = 796
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 171
>03_01_0614 +
4515515-4515540,4515988-4516209,4516681-4516768,
4517084-4517123,4517259-4517305,4517464-4517584,
4517931-4518091
Length = 234
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/43 (30%), Positives = 29/43 (67%)
Frame = +2
Query: 332 LEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIA 460
L+++ ++LH+ + + DLPT++ +++ A Y KQ+L ++A
Sbjct: 187 LDEESEELHQKFLEKDIDLPTFVQKYKKLRAAYH-KQALLHLA 228
>09_02_0213 - 5842150-5842261,5842729-5842925
Length = 102
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 385 PTHLFDSLPMGHG*VPHKAESAEYRRHHKQTGRTDRRGSEGQ 510
P H +L H VPH A+ R H +Q ++RG EG+
Sbjct: 13 PRHAVQTLLCRHAAVPHVGRRAQ-RAHRRQPTTRNQRGKEGK 53
>12_02_0417 -
18896949-18897269,18897340-18897424,18899561-18899656,
18900418-18900476,18901285-18901359
Length = 211
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 172 GIVQGIPSLLTGLVARGTDH 113
G+V GIP LL G + RG DH
Sbjct: 161 GVVNGIPQLLQGEMHRGADH 180
>10_02_0180 + 6292190-6292654,6293923-6294915
Length = 485
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 33 KLFAVSDNLL*TALIFKFLW*K*LNTG*SVPLATRPVSRLGIP*TMPPNQATSVSTINSL 212
+++ VSD T + KF W + G +PLA S+LG T N A VST+ S+
Sbjct: 396 RVYEVSDIKWTTVNLLKFGWAEFAGGG--IPLAGDLTSKLGSDHTRCKNSAGEVSTVVSM 453
Query: 213 FL 218
L
Sbjct: 454 LL 455
>07_03_0375 +
17408815-17409035,17422820-17423477,17423780-17424161,
17424236-17424550,17424727-17425118,17432479-17432508
Length = 665
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 138 VADDLGQMLQDAKEDCESEKGAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLEFLQW 193
>08_02_0204 -
14253258-14253383,14253685-14253878,14254029-14254743,
14254811-14254837,14258779-14258838,14263174-14264844,
14267402-14267518,14267593-14267763,14270248-14270346,
14271684-14271770,14272392-14272475,14272929-14273068,
14274414-14274494,14275492-14275680,14275986-14276022
Length = 1265
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
+++DLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 451 VAEDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 506
>11_03_0072 +
9605273-9606814,9616982-9617016,9617271-9617348,
9617427-9617501,9617583-9617657,9617731-9617977,
9618070-9618313,9618852-9619309,9619388-9619675,
9619751-9619788,9619882-9620452
Length = 1216
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 260 DDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
DDLG++ D + + K A L +LED R L+ + L T L QW
Sbjct: 118 DDLGQMLQDAKEDCESEKEAHKLERMLEDHRTSLYPGYEQGHKKLDTTLEFLQW 171
>07_03_0482 +
18589573-18589728,18589889-18590065,18590518-18590688,
18590913-18591029,18591614-18591742,18592210-18592311,
18592412-18592498,18592585-18592638,18594880-18595016,
18595181-18595235,18596133-18596188,18596275-18596334,
18596442-18596529,18596634-18597371,18597451-18597511,
18598301-18598403,18599180-18599311,18599393-18599477
Length = 835
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 180 QATSVSTINSLFLTLRWELWISWWGCQMIWAS-LILSS 290
Q ++ ++ LFL ++ SWW C M W L+L++
Sbjct: 304 QEKALVSLAKLFLEFKYAPTPSWWDCTMYWLDRLVLAA 341
>04_03_0245 - 13331603-13332111,13332653-13333025
Length = 293
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKLDTFVEGV--TRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DDLG++ V + K A L ++LED R L+ + L T L QW
Sbjct: 37 VADDLGQMLQDAREVCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLEFLQW 92
>01_07_0353 +
42962769-42962972,42963062-42963138,42963571-42963817,
42963907-42964476,42964998-42965171,42965514-42965640,
42965719-42965828,42966707-42966907,42966999-42967966,
42968110-42968358,42968760-42969105
Length = 1090
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 492 SICPTCLLMMSAIFRRLC 439
S+CP CL ++S F+RLC
Sbjct: 199 SVCPNCLPLISKHFQRLC 216
>11_04_0166 +
14317129-14317962,14318042-14318809,14319008-14319740,
14353399-14353892,14353971-14354417,14354505-14355110,
14355204-14355391,14355470-14355640,14355723-14355810
Length = 1442
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DD G++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 37 VADDFGQMLQDAKEDCESEKGAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLEFLQW 92
>05_03_0205 -
10012256-10012588,10012676-10012826,10012909-10013140,
10013310-10013520,10013649-10013767,10013851-10014009,
10014082-10014283,10014368-10014738,10014827-10014891,
10014981-10015025,10015096-10015161,10015257-10015322,
10015591-10015665,10015743-10015814,10016264-10016335,
10016595-10016666,10017554-10017625,10017706-10017777,
10023644-10023830,10024597-10024852
Length = 965
Score = 27.9 bits (59), Expect = 6.9
Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 161 LNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLS--DDL--GKLDTFVEGVTRKVAQYLGE 328
L N G S N+ +P+ ++G L +L LS D++ GK+ ++ +T ++G+
Sbjct: 190 LTNLLSLGISSDNFTGSLPE-ELGNLTKLQQLSASDNVFKGKIPAYLGTMTNLEDIWIGD 248
Query: 329 VLEDQRDKLHENLMANNSDLPTYLTRFQWDMA--KYPIKQSLRNIA----DIISKQVGQI 490
++ + MA+ S L + D+ ++ + + L+ + + K I
Sbjct: 249 IINGVSPLAFISNMASLSTLILRNCKISSDLGAVEFSMFKQLKLLFLGNNSLTGKLPDGI 308
Query: 491 DADLKVKSFAYNAFKGNLHNFREETDREL 577
+ LKV F+YN G++ ++ + + +L
Sbjct: 309 SSSLKVIDFSYNQLTGSIPSWARQNNLQL 337
>03_05_0086 -
20642873-20643033,20643384-20643504,20643698-20643744,
20643882-20643921,20644331-20644418,20644949-20645161,
20645589-20645628,20646332-20646416
Length = 264
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +2
Query: 314 QYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIA 460
Q L L+++ ++LH+ + + DLPT++ + + Y KQ+L ++A
Sbjct: 211 QKLMAKLDEESEELHQKFLEKDIDLPTFVQKHKKLRTAYH-KQALLHLA 258
>12_02_0098 +
13592581-13593120,13595729-13596668,13596879-13597502,
13604810-13604946,13604994-13605035
Length = 760
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 415
++DDLG++ D + + K L ++LED R L+ + L T L QW
Sbjct: 296 VADDLGQMLQDAREDCESEKEDHKLDKMLEDHRTSLYPGCEQGHKKLNTTLEFLQW 351
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,491,192
Number of Sequences: 37544
Number of extensions: 343143
Number of successful extensions: 1000
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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