Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0368
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    31   0.039
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   1.9  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   2.6  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   3.4  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   3.4  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.9  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 30.7 bits (66), Expect = 0.039
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +3

Query: 201 INSLFL---TLRWELWISWWGCQMIWASLIL 284
           +N +FL   T RW  ++ +  C MIW SLIL
Sbjct: 272 LNCVFLLETTFRWVFFVQFIQCTMIWCSLIL 302


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 436  KAESAEYRRHHKQTGRTDRRGSEG 507
            +A  A  R+ H+Q  + +RRG EG
Sbjct: 1091 RARMARLRQRHRQHQQDERRGVEG 1114


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -1

Query: 187 VA*FGGIVQGIPSLLTGLVARGTDH 113
           VA  G I+  I   LTGLV R TDH
Sbjct: 447 VALGGTIIGVIWGFLTGLVTRFTDH 471


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 189 SVSTINSLFLTLRWELWISWWGCQMIWASLIL 284
           ++  +  L +  RW     +  C MIW SL+L
Sbjct: 252 ALKCVELLEIIFRWVFLGQFIQCVMIWCSLVL 283


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/18 (61%), Positives = 15/18 (83%), Gaps = 1/18 (5%)
 Frame = +2

Query: 218 DLKVGTLDQLVG-LSDDL 268
           +L +GTLDQL G L+D+L
Sbjct: 309 ELDIGTLDQLAGSLADEL 326


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 213 FLTLRWELWISWWGCQMIWASLILSS 290
           FLT R +LWISW     ++  L+L +
Sbjct: 364 FLT-RGDLWISWEEGMKVFEELLLDA 388


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,202
Number of Sequences: 2352
Number of extensions: 13892
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)