Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0368
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h at... 190 7e-49
AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein... 190 7e-49
AC024762-3|AAO91689.2| 133|Caenorhabditis elegans Vacuolar h at... 117 6e-27
Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z50756-3|CAI79214.1| 305|Caenorhabditis elegans Hypothetical pr... 28 6.2
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 8.2
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 27 8.2
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 27 8.2
>AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h
atpase protein 11, isoforma protein.
Length = 384
Score = 190 bits (463), Expect = 7e-49
Identities = 91/163 (55%), Positives = 113/163 (69%)
Frame = +2
Query: 104 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 283
EYW+IS PG+K WD LN +T GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8 EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65
Query: 284 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIAD 463
E V RK+ QY EVLE+ + K+ ENL+ N D+ TY+T+FQW+ AKYP+KQSL+ +++
Sbjct: 66 SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSE 125
Query: 464 IISKQVGQIDADLKVKSFAYNAFKGNLHNFREETDRELIDPQL 592
II KQ+ QID DLKVKS YN K L + +T L+ L
Sbjct: 126 IIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDL 168
Score = 33.9 bits (74), Expect = 0.094
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 531 LKEIYTILEKKQTGSLLTRNLADLVKKEHF 620
LK +++K GSLLT++LADLVK + F
Sbjct: 148 LKNALASMDRKTVGSLLTKDLADLVKADDF 177
>AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein
protein.
Length = 384
Score = 190 bits (463), Expect = 7e-49
Identities = 91/163 (55%), Positives = 113/163 (69%)
Frame = +2
Query: 104 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 283
EYW+IS PG+K WD LN +T GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8 EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65
Query: 284 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIAD 463
E V RK+ QY EVLE+ + K+ ENL+ N D+ TY+T+FQW+ AKYP+KQSL+ +++
Sbjct: 66 SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSE 125
Query: 464 IISKQVGQIDADLKVKSFAYNAFKGNLHNFREETDRELIDPQL 592
II KQ+ QID DLKVKS YN K L + +T L+ L
Sbjct: 126 IIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDL 168
Score = 33.9 bits (74), Expect = 0.094
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 531 LKEIYTILEKKQTGSLLTRNLADLVKKEHF 620
LK +++K GSLLT++LADLVK + F
Sbjct: 148 LKNALASMDRKTVGSLLTKDLADLVKADDF 177
>AC024762-3|AAO91689.2| 133|Caenorhabditis elegans Vacuolar h
atpase protein 11, isoformb protein.
Length = 133
Score = 117 bits (282), Expect = 6e-27
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +2
Query: 104 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 283
EYW+IS PG+K WD LN +T GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8 EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65
Query: 284 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 379
E V RK+ QY EVLE+ + K+ ENL+ N
Sbjct: 66 SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGN 97
>Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical
protein R08H2.8 protein.
Length = 367
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 227 VGTLDQLVGLSDDLGKLDTFVEGVTR 304
VG D + GL GKL+ F+ GVT+
Sbjct: 161 VGQYDYITGLEGSSGKLNVFMGGVTK 186
>Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical
protein T07G12.5 protein.
Length = 555
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +2
Query: 275 LDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPT----YLTRFQWDMAKYPIKQ 442
LD G TR+ ++ E+ ED + + N LP+ + R+ W + P+
Sbjct: 467 LDNITGGATRRQRGFVSEIDEDDDVEEQATVEMNGYALPSKLNQFFLRYSW-LTYLPVIP 525
Query: 443 SLRNIADIISK 475
S R I +I K
Sbjct: 526 SEREIREIEEK 536
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +2
Query: 212 IPDLKVGTLDQLVGLSDDLGKLDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLP 391
+ D+ + + +L+GL D K DTF+ +T + ++ ++ + N S L
Sbjct: 101 LKDISMESSKELIGLGSDAFKYDTFIHNLTSVRDSFKFPGKDEYYAEVESVMKFNMSKLE 160
Query: 392 TYLTRFQ 412
+ FQ
Sbjct: 161 DVMNEFQ 167
>Z50756-3|CAI79214.1| 305|Caenorhabditis elegans Hypothetical
protein T08D10.4 protein.
Length = 305
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 148 LLTGLVARGTDHPVFSHFHHKNLKINAVYNK-LSETANNFGETTR 17
+LT + + + V HFH K+LKI + NK + E N+ T+
Sbjct: 93 VLTSISSDLASNNVTEHFHDKSLKIEQMKNKTIRENDNSHNNQTQ 137
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 452 NIADIISKQVGQIDADLKVKSFAYNAFKGNLHNFREETDRELIDPQL 592
N A IS + D + F +N F GN +NF+ + D +L +L
Sbjct: 453 NFAVGISTRYYYNPTDGQCHPFTFNGFLGNFNNFQNQADCQLFCARL 499
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 509 KSFAYNAFKGNLHNF 553
KSFAYN KGN +NF
Sbjct: 487 KSFAYNGAKGNQNNF 501
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 497 DLKVKSFAYNAFKGNLHNFREETD 568
D++ K F YN +GN +NF + D
Sbjct: 717 DMQCKQFTYNGRRGNQNNFLTQED 740
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 497 DLKVKSFAYNAFKGNLHNFREETD 568
D++ K F YN +GN +NF + D
Sbjct: 1135 DMQCKQFTYNGRRGNQNNFLTQED 1158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,964,805
Number of Sequences: 27780
Number of extensions: 288837
Number of successful extensions: 822
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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