Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0364
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6D9F Cluster: PREDICTED: similar to CG4433-PB,...    36   1.00 
UniRef50_Q2UFI4 Cluster: Predicted protein; n=1; Aspergillus ory...    33   5.3  
UniRef50_Q0RLM9 Cluster: Replication initiator protein; n=7; Fra...    33   7.0  
UniRef50_Q4UI21 Cluster: Dynein heavy chain, putative; n=2; Thei...    33   9.3  
UniRef50_A7RJV8 Cluster: Predicted protein; n=2; Nematostella ve...    33   9.3  
UniRef50_A0DJA6 Cluster: Chromosome undetermined scaffold_53, wh...    33   9.3  
UniRef50_P95936 Cluster: Orf c01038 protein; n=3; Sulfolobaceae|...    33   9.3  

>UniRef50_UPI0000DB6D9F Cluster: PREDICTED: similar to CG4433-PB,
           isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG4433-PB, isoform B - Apis mellifera
          Length = 254

 Score = 35.9 bits (79), Expect = 1.00
 Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
 Frame = +2

Query: 422 VTSSRKYVNIAYDVLMRTFKWTRPRKCSRLILQKV-IFNVLIAETELPLATVLPGRDENV 598
           ++  + ++++ + +     +   P  C   +L+ V IF   +   +LP++ +  G    +
Sbjct: 156 ISRHKNHISLYFAIAALCIEKKVPYYCKLYVLESVNIFRKYVQLLDLPISLLTKG----M 211

Query: 599 RIHFLRFTYFRKLYSCFLLRTGVKTHYELTEIYLQDDVNY 718
             H  ++ +FRKLY  F   T + T  E++ + L+ D+ +
Sbjct: 212 IAHKSQYVWFRKLYMIFSRYTFINTFQEMSALDLELDLQF 251


>UniRef50_Q2UFI4 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 237

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +2

Query: 527 IFNVLIAETELPLATVLPGRDENVRIHFLRFTYFRKLYSC 646
           + N  +A+TELPL  +LPG + N+R+ ++      + Y+C
Sbjct: 41  VSNCSVAKTELPLHALLPGPNPNLRLKYVTVGRGTQNYTC 80


>UniRef50_Q0RLM9 Cluster: Replication initiator protein; n=7;
           Frankia|Rep: Replication initiator protein - Frankia
           alni (strain ACN14a)
          Length = 418

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -2

Query: 579 GRTVANGSSVSAIRT-LKITFCNISREHFLGLVHLNVRIR 463
           G   A+G SV+A+R  L++TF   +     GLVHL+V IR
Sbjct: 134 GLAAASGRSVAALRRELRVTFVKAAEMQARGLVHLHVVIR 173


>UniRef50_Q4UI21 Cluster: Dynein heavy chain, putative; n=2;
            Theileria|Rep: Dynein heavy chain, putative - Theileria
            annulata
          Length = 3283

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 333  YIKCR*FVLEYFIDA*TGIIEQSIYTPFLWSKVYDEDQNQI 211
            Y+KC  F+L   +   + II + +Y PF WSK Y+ + N +
Sbjct: 2979 YLKCSRFILLKCVVIHSIIILRQVYIPFGWSKKYNFNTNDL 3019


>UniRef50_A7RJV8 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 125

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 247 KKWCVNALLNYSGSRINKVF*YKLSTFNI 333
           KKWCVN   N+   R+NK+   + + FN+
Sbjct: 40  KKWCVNMFENWRADRVNKITAKESTIFNV 68


>UniRef50_A0DJA6 Cluster: Chromosome undetermined scaffold_53, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_53,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 298

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 18/84 (21%), Positives = 40/84 (47%)
 Frame = +2

Query: 443 VNIAYDVLMRTFKWTRPRKCSRLILQKVIFNVLIAETELPLATVLPGRDENVRIHFLRFT 622
           + I  +++M+ F  + P++ S LI+Q+  F  +++ T+  L  +  G ++++   +    
Sbjct: 45  IKIFQEMMMKKFYKSYPQQTSELIIQRKNFKEMLSSTQNKLRQIWVGLEDSINQMYEMIE 104

Query: 623 YFRKLYSCFLLRTGVKTHYELTEI 694
              K Y  F+      T    TE+
Sbjct: 105 MEDKFYVNFITNNVNPTELSNTEL 128


>UniRef50_P95936 Cluster: Orf c01038 protein; n=3;
           Sulfolobaceae|Rep: Orf c01038 protein - Sulfolobus
           solfataricus
          Length = 1000

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 23/72 (31%), Positives = 38/72 (52%)
 Frame = +2

Query: 407 HKLDNVTSSRKYVNIAYDVLMRTFKWTRPRKCSRLILQKVIFNVLIAETELPLATVLPGR 586
           + LD V ++ + + I  +   RTF  T  +  S+L   +VIF V+  E  L  + V+ G 
Sbjct: 686 YNLDAVNNALEIITITPEDY-RTFS-TAYKDYSKLAGTEVIFEVVPLELRLLKSIVIDGS 743

Query: 587 DENVRIHFLRFT 622
           +ENV +H   F+
Sbjct: 744 NENVNLHVACFS 755


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,741,292
Number of Sequences: 1657284
Number of extensions: 12614049
Number of successful extensions: 23618
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23608
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)