Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0364
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.6  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 422 VTSSRKYVNIAYDVLMRTFKWTRPRKCSRLIL 517
           V  SRK   ++ DV     +W +  K +  IL
Sbjct: 167 VVDSRKNTTVSIDVFPAVARWMQDPKTNHGIL 198


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 388 MLILVFYYRFCSLCIM*RVY 329
           + +L  YY +C+L I+  +Y
Sbjct: 280 LFLLCIYYFYCALIILLCIY 299


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 255 PFLWSKVYDEDQ 220
           PFL   +YDED+
Sbjct: 55  PFLTETIYDEDE 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,376
Number of Sequences: 336
Number of extensions: 3402
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)