Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0364
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    24   4.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   5.4  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   7.2  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   9.5  

>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = +2

Query: 629 RKLYSCFLLRTG---VKTHYELTEIYLQD 706
           R L  CF LRTG   V T +++  +Y +D
Sbjct: 196 RCLLRCFFLRTGVFHVDTGFDVERLYTRD 224


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 285 TGIIEQSIYTPFLWSKVYD 229
           TG+ + SI  P LW+ +YD
Sbjct: 644 TGVPQGSILGPTLWNVMYD 662


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 282 GIIEQSIYTPFLWSKVYD 229
           G+ ++SI  P LW+ +YD
Sbjct: 639 GVPQESILGPTLWNVMYD 656


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 525 TFCNISREHFLGLVHLNVRIR 463
           TFC + +    GL HL+  IR
Sbjct: 340 TFCRMGKSIANGLAHLHTEIR 360


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,080
Number of Sequences: 2352
Number of extensions: 13815
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)