Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0362
         (570 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7GK88 Cluster: tRNA synthetase class II; n=1; Bacillus...    34   2.7  
UniRef50_A2E1J4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.2  
UniRef50_A0MG43 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    32   8.2  
UniRef50_Q4WB83 Cluster: Glycosyl hydrolase, putative; n=3; Tric...    32   8.2  

>UniRef50_A7GK88 Cluster: tRNA synthetase class II; n=1; Bacillus
           cereus subsp. cytotoxis NVH 391-98|Rep: tRNA synthetase
           class II - Bacillus cereus subsp. cytotoxis NVH 391-98
          Length = 352

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -2

Query: 284 GDFLEDPEK--LRPALCF-IFPHLCTFTDIKQLINHRYYTFKSEETLNRQNKLNHTTSLL 114
           G +L+  +K  L PALC  ++P L      KQ +N+  YT K     +    LN+TT LL
Sbjct: 167 GKYLDVNQKYVLNPALCLHVYPQLRD----KQGVNNTVYTIKGSCFRDESGNLNNTTRLL 222

Query: 113 AFL 105
            F+
Sbjct: 223 EFV 225


>UniRef50_A2E1J4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 2215

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 434 LIFMKNDMIIWCEVNVM--KMINLRH**TEMK*DDMG*NIISVKWWSFTEISGDFLEDPE 261
           +IF  ND++I C++NV+  K  N     T  K DD     IS   W F+E+    ++D E
Sbjct: 681 VIFKANDVLISCQMNVLTIKWGNNERNQTFQKTDDWHFVFISSSGWMFSEMVNVIVDDTE 740


>UniRef50_A0MG43 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=1; Nymphon gracile|Rep: NADH-ubiquinone oxidoreductase
           chain 5 - Nymphon gracile
          Length = 558

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 14/62 (22%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
 Frame = -2

Query: 539 CLMYRTVCFLVYIFLKGFYD--LVTET--FNSFLILIYILIFMKNDMIIWCEVNVMKMIN 372
           CLM+ ++C   + FL  FY   L+ ++  F  + + + +++++ N M ++  + ++K + 
Sbjct: 331 CLMFSSMCLGAFPFLASFYSKHLILDSFIFMDYNMFMLLVLYISNSMTLFYSLRLVKFLG 390

Query: 371 LR 366
            R
Sbjct: 391 SR 392


>UniRef50_Q4WB83 Cluster: Glycosyl hydrolase, putative; n=3;
           Trichocomaceae|Rep: Glycosyl hydrolase, putative -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 687

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 554 NWTFLCLMYRTVCFLVYIFLKGFYDLVTETFNSFL 450
           NW +     R   F+VY+FLK  Y L  E + +F+
Sbjct: 323 NWDYRYSWLRDAAFVVYVFLKNGYPLEAEAYINFI 357


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,001,568
Number of Sequences: 1657284
Number of extensions: 8516586
Number of successful extensions: 20308
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20304
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)