Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0362
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    25   2.3  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   4.0  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   7.0  
L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    23   9.3  

>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 229 GKMKQSAGRNFSGSSKKSPEISVNDHH 309
           GK  +S G +    + K+PE ++++HH
Sbjct: 118 GKAVRSVGTDTRDCTPKTPEYTLSNHH 144


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 200  QLINHRYYTFKSEETLNR-QNKLNHTTSL 117
            +L NH YY F  + +LN  +N++  + SL
Sbjct: 947  RLFNHFYYLFDFDSSLNSFRNRIFSSNSL 975


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -2

Query: 500 FLKGFYDLVTETFNSFLILIYI 435
           FL+ F+D+    F+SFL LI++
Sbjct: 12  FLEFFFDIFQLYFHSFLGLIFM 33


>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 482 DLVTETFNSFLILIYILIFMKNDMI 408
           D + +T N F + I I+ +  +DM+
Sbjct: 104 DAIVDTINDFRLKIAIVAYEPDDMV 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,578
Number of Sequences: 2352
Number of extensions: 9366
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)