Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0361
         (431 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   4.6  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   6.1  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 198  AVVVLFSN*KGKGVAPYSRI 139
            AV V   N KGK VA YS++
Sbjct: 1839 AVRVTIENAKGKKVAKYSKV 1858


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 14/52 (26%), Positives = 19/52 (36%)
 Frame = -1

Query: 371 GTMSASNGKIIFQIGPVVSEPIRTKQPNKSXXXXXXXXXXXFQSKLKNNNFI 216
           G+  AS       + P+  E IRT+QP                 KL+N   I
Sbjct: 37  GSFEASQKSSDGSLDPLDEEDIRTEQPTSCVEEVLPTDPLELHEKLENETDI 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,443
Number of Sequences: 2352
Number of extensions: 4332
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)