Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0360
         (781 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   4.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   5.6  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   5.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   5.6  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 149 DDCGKAIANVNVSAHYTRASVCQYVMATV 63
           D CG+    +N S H+ RAS+    M+ +
Sbjct: 23  DTCGRDTYALNQSLHFVRASLSNLDMSVL 51


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 149 DDCGKAIANVNVSAHYTRASVCQYVMATV 63
           D CG+    +N S H+ RAS+    M+ +
Sbjct: 113 DTCGRDTYALNQSLHFVRASLSNLDMSVL 141


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 376 VVANRFFTKVDVQHLTSGTVLYCWRQLTPS 287
           +  + F      QHL     +Y W++L PS
Sbjct: 610 IALSEFVINPHQQHLDQWNWVYEWKELIPS 639


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 328 SGTVLYCWRQLTPSL 284
           SGT L CW Q   SL
Sbjct: 235 SGTALNCWTQTENSL 249


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 328 SGTVLYCWRQLTPSL 284
           SGT L CW Q   SL
Sbjct: 106 SGTALNCWTQTENSL 120


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 328 SGTVLYCWRQLTPSL 284
           SGT L CW Q   SL
Sbjct: 235 SGTALNCWTQTENSL 249


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,991
Number of Sequences: 438
Number of extensions: 4087
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)