Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0359
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0WWS3 Cluster: Putative uncharacterized protein; n=1; ...    35   2.3  
UniRef50_Q54M01 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  

>UniRef50_Q0WWS3 Cluster: Putative uncharacterized protein; n=1;
           Arabidopsis thaliana|Rep: Putative uncharacterized
           protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 80

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +1

Query: 22  MKNAVNCAS*CELQDTFEHRHFERTLR 102
           MKN   C + CELQ+   HR FER LR
Sbjct: 1   MKNVAKCDTWCELQNPVNHRVFERKLR 27


>UniRef50_Q54M01 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 436

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = -2

Query: 422 ISINKGFDPRKANYGSINI-AFFYLFLYMYINYDSQFNYNLYYIQTI*SF*NTNFNISL* 246
           I++ K   P K+    I I + F  F Y  + YD++FN N    Q++ +F +TN +I++ 
Sbjct: 180 INVLKNLKPFKSIPKHIEIVSLFNRFPYKQLFYDNEFNLN--KTQSLKTFKSTNEDITIE 237

Query: 245 NLYY 234
            LYY
Sbjct: 238 ELYY 241


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,257,762
Number of Sequences: 1657284
Number of extensions: 11151510
Number of successful extensions: 25199
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25136
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)