Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0359
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   1.4  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   7.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.5  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = -1

Query: 357 LFIFIYVHQLRLTIQLQLVLYTNNLIILKYKFQYISI 247
           +++FI++   +      +V+YT NL  L + F ++ +
Sbjct: 297 MYLFIHIRSRQEDTDTLVVIYTFNLFYLCFCFYWLLV 333


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = -1

Query: 357 LFIFIYVHQLRLTIQLQLVLYTNNLIILKYKFQYISI 247
           +++FI++   +      +V+YT NL  L + F ++ +
Sbjct: 253 MYLFIHIRSRQEDTDTLVVIYTFNLFYLCFCFYWLLV 289


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 583 RCTDRPAKQSKTVLKPQYQ 527
           +CTD+  + +KTV++  Y+
Sbjct: 76  KCTDKQKQGAKTVIQHLYK 94


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 364 HSFIYFYICTSITTHNSITTCTIYKQFNHF 275
           H    F+I   +     + T  IY+ F+HF
Sbjct: 670 HCHFLFHIVIGMNLIIHVGTQLIYRPFSHF 699


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,193
Number of Sequences: 336
Number of extensions: 3111
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)