Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0359
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029727-1|ABL75784.1|  288|Drosophila melanogaster IP17596p pro...    29   8.2  
AY052015-1|AAK93439.1|  230|Drosophila melanogaster LD47387p pro...    29   8.2  
AE014297-63|ABI31122.1|  230|Drosophila melanogaster CG1103-PB, ...    29   8.2  
AE014297-62|AAF52142.2|  230|Drosophila melanogaster CG1103-PA, ...    29   8.2  

>BT029727-1|ABL75784.1|  288|Drosophila melanogaster IP17596p
           protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 110 STDRNVRSKCRCSNVSCSSHYDAQLTA 30
           S + N+ + C C+N+SCSS     +T+
Sbjct: 87  SNNSNIVTNCSCNNISCSSSNTQPITS 113


>AY052015-1|AAK93439.1|  230|Drosophila melanogaster LD47387p
           protein.
          Length = 230

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = -1

Query: 363 ILLFIFIYVHQLRLTIQLQLVLYTNNLIILKYKFQYISIKSLLLI 229
           ++ F   ++H + LT Q Q   Y+N L  L Y F  + + +++++
Sbjct: 151 LVQFYQYFIHNVLLTEQQQQHWYSNGLAYLGYSFYLVVVSTVVVL 195


>AE014297-63|ABI31122.1|  230|Drosophila melanogaster CG1103-PB,
           isoform B protein.
          Length = 230

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = -1

Query: 363 ILLFIFIYVHQLRLTIQLQLVLYTNNLIILKYKFQYISIKSLLLI 229
           ++ F   ++H + LT Q Q   Y+N L  L Y F  + + +++++
Sbjct: 151 LVQFYQYFIHNVLLTEQQQQHWYSNGLAYLGYSFYLVVVSTVVVL 195


>AE014297-62|AAF52142.2|  230|Drosophila melanogaster CG1103-PA,
           isoform A protein.
          Length = 230

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = -1

Query: 363 ILLFIFIYVHQLRLTIQLQLVLYTNNLIILKYKFQYISIKSLLLI 229
           ++ F   ++H + LT Q Q   Y+N L  L Y F  + + +++++
Sbjct: 151 LVQFYQYFIHNVLLTEQQQQHWYSNGLAYLGYSFYLVVVSTVVVL 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,904,461
Number of Sequences: 53049
Number of extensions: 497464
Number of successful extensions: 906
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)