Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0357
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 37 0.012
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 37 0.012
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 35 0.050
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 35 0.050
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 35 0.050
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 35 0.050
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 35 0.050
U41263-4|AAC24426.4| 779|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 31 1.1
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 31 1.1
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 31 1.1
AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical ... 29 2.5
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 29 2.5
AF016688-5|AAB66073.1| 666|Caenorhabditis elegans Hypothetical ... 29 3.3
Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical p... 28 5.8
Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical pr... 28 5.8
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 28 7.6
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 28 7.6
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp... 28 7.6
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical... 28 7.6
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 28 7.6
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 28 7.6
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 28 7.6
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 533 SLRFETPMFVGGVDDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVDINSSIKSSNIQEC 706
+L+ T +F+GG+ + +P+ V F GC+ ++++NS VD+ + S +I C
Sbjct: 2905 TLKPGTEIFIGGLPPG--LNSPDDVVEQSFQGCVYEILINSQDVDLQNLSSSGDISSC 2960
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 533 SLRFETPMFVGGVDDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVDINSSIKSSNIQEC 706
+L+ T +F+GG+ + +P+ V F GC+ ++++NS VD+ + S +I C
Sbjct: 2905 TLKPGTEIFIGGLPPG--LNSPDDVVEQSFQGCVYEILINSQDVDLQNLSSSGDISSC 2960
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 533 SLRFETPMFVGGVDDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVDINSSIKSSNIQEC 706
+L+ T +F+GG+ + +P+ V F GC+ ++++NS VD+ + S +I C
Sbjct: 455 TLKPGTEIFIGGLPPG--LNSPDDVVEQSFQGCVYEILINSQDVDLQNLSSSGDISSC 510
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 545 ETPMFVGGV--DDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVD 667
+ P +VGGV D + N GV FSGCIKD LN ++D
Sbjct: 3430 QPPFYVGGVPADLAGFARNLVVGVRSQFSGCIKDFKLNGKSLD 3472
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 545 ETPMFVGGV--DDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVD 667
+ P +VGGV D + N GV FSGCIKD LN ++D
Sbjct: 3462 QPPFYVGGVPADLAGFARNLVVGVRSQFSGCIKDFKLNGKSLD 3504
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 545 ETPMFVGGV--DDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVD 667
+ P +VGGV D + N GV FSGCIKD LN ++D
Sbjct: 1276 QPPFYVGGVPADLAGFARNLVVGVRSQFSGCIKDFKLNGKSLD 1318
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 545 ETPMFVGGV--DDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVD 667
+ P +VGGV D + N GV FSGCIKD LN ++D
Sbjct: 3462 QPPFYVGGVPADLAGFARNLVVGVRSQFSGCIKDFKLNGKSLD 3504
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 545 ETPMFVGGV--DDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVD 667
+ P +VGGV D + N GV FSGCIKD LN ++D
Sbjct: 3462 QPPFYVGGVPADLAGFARNLVVGVRSQFSGCIKDFKLNGKSLD 3504
>U41263-4|AAC24426.4| 779|Caenorhabditis elegans Hypothetical
protein T19D12.6 protein.
Length = 779
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 554 MFVGGVDDSTVVVNPNAGVS-GGFSGCIKDVVLNSNAVDINSSIKSSNIQEC 706
+F+G +DD+ + P+ GF+GC+K + LN A+ + S ++N+ EC
Sbjct: 507 IFIGSLDDNDI---PSVVKDIEGFAGCVKRIRLNGKAI-LMQSTYATNVTEC 554
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 554 MFVGGVDDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVDINSSIKSSNIQECN 709
+ +GG D N ++ F GCI DV LN V + ++ I C+
Sbjct: 2789 LILGGFSDDLKPPNNEIPITSFFIGCISDVFLNMKRVSLAPEKHNAQIGMCS 2840
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 554 MFVGGVDDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVDINSSIKSSNIQECN 709
+ +GG D N ++ F GCI DV LN V + ++ I C+
Sbjct: 2789 LILGGFSDDLKPPNNEIPITSFFIGCISDVFLNMKRVSLAPEKHNAQIGMCS 2840
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 554 MFVGGVDDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVDINSSIKSSNIQECN 709
+ +GG D N ++ F GCI DV LN V + ++ I C+
Sbjct: 2789 LILGGFSDDLKPPNNEIPITSFFIGCISDVFLNMKRVSLAPEKHNAQIGMCS 2840
>AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical
protein F52G3.4 protein.
Length = 1009
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 515 FVFIAYAYERVHGVWGPFSFPTY 447
+VF+AY++ R G W PF Y
Sbjct: 397 YVFVAYSFNRYDGSWIPFGVDVY 419
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 29 AARNHDSSETSLLFLSQAMNVSRFHSSDDTSTCRSTPPEVSRCLTSS 169
AA N +++E + ++++ N F S + PE+S+ +TSS
Sbjct: 537 AAENAENAENHVTAVAESENSENFSSESENPAENDENPEISKIMTSS 583
>AF016688-5|AAB66073.1| 666|Caenorhabditis elegans Hypothetical
protein F18A12.7 protein.
Length = 666
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 511 CSSLTLMNEYTVSGDLFLFLPMLIALRGY 425
CSSLT+ N S D+ LFL I ++G+
Sbjct: 563 CSSLTIQNSLITSQDINLFLKHWIWIKGF 591
>Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 621 KPPLTPALGFTTTVESSTPPT 559
KPPL P G+ T SSTP T
Sbjct: 202 KPPLLPKPGYFATFSSSTPQT 222
>Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 621 KPPLTPALGFTTTVESSTPPT 559
KPPL P G+ T SSTP T
Sbjct: 202 KPPLLPKPGYFATFSSSTPQT 222
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 131 STPPEVSRCLTSSCGSHPLGGTLSLRLSCCHRSPSGH 241
+TPP+ S TS HPL L +C R H
Sbjct: 293 TTPPKTSSSGTSGAKEHPLASVLVCESNCNQRGECVH 329
>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1121
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 563 GGVDDSTVVVNPNAGVSGGFSG 628
GGVDD+ V+ + N G++ G SG
Sbjct: 816 GGVDDTPVLAHANVGIAMGQSG 837
>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1045
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 563 GGVDDSTVVVNPNAGVSGGFSG 628
GGVDD+ V+ + N G++ G SG
Sbjct: 816 GGVDDTPVLAHANVGIAMGQSG 837
>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
protein Y105E8A.12b protein.
Length = 1045
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 563 GGVDDSTVVVNPNAGVSGGFSG 628
GGVDD+ V+ + N G++ G SG
Sbjct: 816 GGVDDTPVLAHANVGIAMGQSG 837
>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
protein Y105E8A.12a protein.
Length = 1121
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 563 GGVDDSTVVVNPNAGVSGGFSG 628
GGVDD+ V+ + N G++ G SG
Sbjct: 816 GGVDDTPVLAHANVGIAMGQSG 837
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 131 STPPEVSRCLTSSCGSHPLGGTLSLRLSCCHRSPSGH 241
+TPP+ S TS HPL L +C R H
Sbjct: 235 TTPPKTSSSGTSGAKEHPLASVLVCESNCNQRGECVH 271
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 131 STPPEVSRCLTSSCGSHPLGGTLSLRLSCCHRSPSGH 241
+TPP+ S TS HPL L +C R H
Sbjct: 417 TTPPKTSSSGTSGAKEHPLASVLVCESNCNQRGECVH 453
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,888,833
Number of Sequences: 27780
Number of extensions: 292121
Number of successful extensions: 979
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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