Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0355
         (729 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5Z379 Cluster: Putative uncharacterized protein; n=1; ...    36   1.0  
UniRef50_Q54L44 Cluster: Putative uncharacterized protein; n=1; ...    35   1.8  
UniRef50_UPI00006A07DB Cluster: UPI00006A07DB related cluster; n...    33   5.4  
UniRef50_Q8I1Y3 Cluster: Putative uncharacterized protein PFD022...    33   7.2  
UniRef50_P38853 Cluster: Kelch repeat-containing protein 1; n=3;...    33   7.2  

>UniRef50_A5Z379 Cluster: Putative uncharacterized protein; n=1;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 626

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 24/72 (33%), Positives = 35/72 (48%)
 Frame = -1

Query: 543 NCQIGNSNPIFL*NIQSKIKIHDSSFKIDIVSIRNSLFYFLKEKNDLRLHLISKKKRLMK 364
           N Q GN+NP  L N  S    + ++   +I+     L  F K+   L L   S + RLM 
Sbjct: 464 NSQKGNNNPYCLDNEISWTNWNTTAMAKEILDFTKKLIQFRKQHKILHL---SSEPRLMD 520

Query: 363 FRAYYLKIMVYH 328
           +++Y L  M YH
Sbjct: 521 YKSYGLPDMSYH 532


>UniRef50_Q54L44 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 979

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = -1

Query: 552  NKKNCQIGNSNPIFL*NIQSKIKIHDSSFKIDIVSIRNSLFYFLK-EKNDLR-LHLISKK 379
            +K N ++ N     L  IQS   I DS   +++  +R++LFYF K  KNDL+ L  I+ K
Sbjct: 806  SKTNTELNNE----LKQIQSYYFIDDSIMLLELGEVRDALFYFKKYGKNDLKSLSTINLK 861

Query: 378  KRLMKFRAYYLKIMVYHYFIH 316
            K +   +AY ++I+  +  ++
Sbjct: 862  KII---KAYEMEIVAQYISLY 879


>UniRef50_UPI00006A07DB Cluster: UPI00006A07DB related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A07DB UniRef100 entry -
           Xenopus tropicalis
          Length = 408

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 498 VYFTKK*GSNYLFDNFFCLTKV-VYPIYDP**ASYLHTNDFQYSLYADRTIKITSFGFLF 674
           +YF+++  +  LF  ++  + + +YP+YD     YLHT+     +Y    I +    F+F
Sbjct: 198 MYFSERVTNVLLFSMYYVTSHLLIYPVYDKLCQLYLHTDVGLLEMYKKADIYLMKVDFVF 257

Query: 675 SF 680
            F
Sbjct: 258 EF 259


>UniRef50_Q8I1Y3 Cluster: Putative uncharacterized protein PFD0225w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFD0225w - Plasmodium falciparum
            (isolate 3D7)
          Length = 4138

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -1

Query: 480  HDSSFKIDIVSIRNSLFYFLKEKNDLRLHLIS-KKKRLMKFRAYYLKIMVYHY 325
            H+ + K+ +  ++N  FY  K  ND+ L++ S KKK++ +   Y LK+   +Y
Sbjct: 983  HEDTNKLMVSILQNIRFYSNKVYNDIFLNIDSYKKKKMNEINIYLLKLRTKNY 1035


>UniRef50_P38853 Cluster: Kelch repeat-containing protein 1; n=3;
            Saccharomyces cerevisiae|Rep: Kelch repeat-containing
            protein 1 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 1164

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = -1

Query: 504  NIQSKIKIHDSSFKIDIVSIRNSLFYFLKEKNDLRLHLISKKKRLM 367
            N+++   I ++ F I I  ++  LF   +E++DL+  ++  KKRL+
Sbjct: 1101 NVKNSNSIRENQFNIKINDLKAELFITNQERDDLKSEVLELKKRLL 1146


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,779,926
Number of Sequences: 1657284
Number of extensions: 11713410
Number of successful extensions: 21110
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21104
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)