Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0355
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 154 LYKIYHKYVWFFCTLNNLMR*RLLVGVS 71
           +Y++YH  + + CT  N  R  +++ +S
Sbjct: 248 IYEMYHLAILWSCTSTNCPRFLIMLALS 275


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1

Query: 168 VLLNNCIKFIINTFGFFAP*II*CDEDCSWACLTYISF 55
           +LL   + F+I T   F   ++   E   W  L YISF
Sbjct: 244 LLLMFAVSFLIITQVIFVICVLVQSEKIVWLHLVYISF 281


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 658 VSGFYFHFILVDIANLCDHEY 720
           +  FYF F+L  +  LC   Y
Sbjct: 134 MKNFYFWFVLKQVMFLCYSTY 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,153
Number of Sequences: 336
Number of extensions: 3416
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)